Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8197

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8197: 16565 - KOG2922 Uncharacterized conserved protein, at 652238 to 654491 16565 mRNA_8198: 16566 - K03190 ureD, ureH urease accessory protein, at 654718 to 655775 16566

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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651,355 - -3.0
651,363 - -0.7
651,367 + -1.7
651,378 - -0.2
651,390 + -2.5
651,517 + -3.0
651,532 - -2.9
651,930 - -2.5
651,945 + 1.1
651,950 + -0.2
652,078 - -2.2
652,378 - -3.3
652,381 + -1.5
652,389 - -3.7
652,398 + -1.7
652,507 - 16565 mRNA_8197 0.12 -1.1
652,673 - 16565 mRNA_8197 0.19 -0.7
652,676 + 16565 mRNA_8197 0.19 -1.5
652,680 - 16565 mRNA_8197 0.20 -1.1
653,099 + 16565 mRNA_8197 0.38 -2.0
653,158 + 16565 mRNA_8197 0.41 0.5
653,870 + 16565 mRNA_8197 0.72 -2.8
654,270 - -2.4
654,283 - -0.6
654,573 - 0.2
654,578 + -1.8
654,578 + -0.5
654,726 + -0.7
654,737 - -1.6
654,743 - -2.5
654,745 + -0.3
655,018 + 16566 mRNA_8198 0.28 -2.0
655,024 - 16566 mRNA_8198 0.29 -0.3
655,181 - 16566 mRNA_8198 0.44 -1.1