Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8195

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8194: 16562 - K20794 NAA40, NAT4 N-alpha-acetyltransferase 40, at 644404 to 645092 16562 mRNA_8195: 16563 - Hypothetical Protein, at 645580 to 648404 16563 mRNA_8196: 16564 - K13501 TRP1 anthranilate synthase / indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase, at 648515 to 650860 16564

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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644,628 - 16562 mRNA_8194 0.33 -2.1
644,650 + 16562 mRNA_8194 0.36 -2.5
644,809 + 16562 mRNA_8194 0.59 -1.5
645,368 + -2.9
645,384 - -0.9
645,384 - -2.0
645,419 + -1.5
645,538 + -2.7
645,541 + 1.0
645,550 - 0.1
646,267 + 16563 mRNA_8195 0.24 -1.2
646,406 - 16563 mRNA_8195 0.29 -0.6
646,417 + 16563 mRNA_8195 0.30 -1.6
647,442 + 16563 mRNA_8195 0.66 -0.5
647,543 - 16563 mRNA_8195 0.69 -1.8
648,230 - -1.6