Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8166

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8165: 16533 - HMMPfam-Saccharopine dehydrogenase-PF03435,SUPERFAMILY--SSF51735, at 569404 to 570854 16533 mRNA_8166: 16534 - BLAST receptor-activated Ca2+-permeable cation channel [Aur..., at 571164 to 574503 16534 mRNA_8167: 16535 - K04350 RASGRP1 RAS guanyl-releasing protein 1, at 574672 to 578875 16535

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
570,181 - 16533 mRNA_8165 0.54 0.2
570,218 - 16533 mRNA_8165 0.56 -3.2
570,507 - 16533 mRNA_8165 0.76 -3.2
570,640 - 16533 mRNA_8165 0.85 -1.5
571,045 - -1.6
571,050 + -1.3
571,072 + 0.2
571,202 - -0.4
571,359 - -1.7
571,370 - 1.4
571,372 - -3.4
571,386 + -1.3
571,513 - 16534 mRNA_8166 0.10 -0.6
571,514 + 16534 mRNA_8166 0.10 -0.9
571,570 + 16534 mRNA_8166 0.12 -1.6
572,091 - 16534 mRNA_8166 0.28 -0.9
572,547 + 16534 mRNA_8166 0.41 0.3
573,009 + 16534 mRNA_8166 0.55 -1.9
573,091 + 16534 mRNA_8166 0.58 -1.2
573,114 - 16534 mRNA_8166 0.58 -2.4
573,447 + 16534 mRNA_8166 0.68 -1.9
573,463 + 16534 mRNA_8166 0.69 -1.3
573,793 - 16534 mRNA_8166 0.79 -2.9
573,943 + 16534 mRNA_8166 0.83 -0.2
574,588 + 1.0
574,592 + -0.8
574,700 - -1.7
574,817 - -2.6
574,887 + 0.0
575,030 + -0.9
575,205 - 16535 mRNA_8167 0.13 -2.3
575,259 - 16535 mRNA_8167 0.14 -1.7
575,470 + 16535 mRNA_8167 0.19 -3.0