Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8152

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8151: 16519 - K19846 SPA2 protein SPA2, at 532598 to 536503 16519 mRNA_8152: 16520 - KOG2944 Glyoxalase, at 536656 to 537504 16520 mRNA_8153: 16521 - HMMPfam-Chalcone-flavanone isomerase-PF02431,SUPERFAMILY--SSF54626, at 537692 to 539063 16521

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
535,731 + 16519 mRNA_8151 0.80 -2.9
535,892 - 16519 mRNA_8151 0.84 -3.2
535,999 - 16519 mRNA_8151 0.87 -2.8
536,164 + -0.4
536,750 + 16520 mRNA_8152 0.11 -2.4
537,125 - 16520 mRNA_8152 0.55 -2.3
537,241 - 16520 mRNA_8152 0.69 -2.9
537,333 - 16520 mRNA_8152 0.80 -1.6
537,361 - 16520 mRNA_8152 0.83 -4.1
537,465 - -1.2
537,470 - -0.1
537,619 - -3.4
537,622 + 1.0
537,641 - -2.8
537,645 - -0.9
537,649 + 0.5
537,652 - -1.9
537,657 - -4.1
537,667 + -1.5
537,668 - -2.6
537,672 - -2.1
537,692 + -0.7
537,695 - -1.3
537,720 - -1.2
537,728 + -1.9
537,728 + -3.2
537,730 - -3.1
537,731 + -0.8
537,843 - 16521 mRNA_8153 0.11 -0.8
538,004 + 16521 mRNA_8153 0.23 -1.7
538,014 - 16521 mRNA_8153 0.23 -0.8
538,024 + 16521 mRNA_8153 0.24 0.9
538,384 - 16521 mRNA_8153 0.50 -3.3