Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8151

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8150: 16518 - K11135 PINX1 Pin2-interacting protein X1, at 530579 to 532165 16518 mRNA_8151: 16519 - K19846 SPA2 protein SPA2, at 532598 to 536503 16519 mRNA_8152: 16520 - KOG2944 Glyoxalase, at 536656 to 537504 16520

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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532,258 - -1.6
532,388 - -3.5
532,392 - -0.4
532,393 + -0.2
532,399 + -2.7
532,407 + -2.4
532,493 - -2.9
532,532 + -1.7
532,536 + 0.1
532,538 - -2.7
532,538 + -0.9
532,543 + -2.3
532,544 - -1.0
532,592 - -0.9
532,680 + -0.5
532,682 - -0.7
532,687 - -1.2
532,696 + -1.1
532,696 + -0.5
532,825 + -3.1
532,836 + -1.9
532,844 - -1.8
532,853 + -2.4
533,110 - 16519 mRNA_8151 0.13 -0.7
533,181 - 16519 mRNA_8151 0.15 -1.3
533,271 + 16519 mRNA_8151 0.17 -2.1
533,392 - 16519 mRNA_8151 0.20 -2.1
533,404 + 16519 mRNA_8151 0.21 -2.0
533,572 - 16519 mRNA_8151 0.25 -1.6
533,580 + 16519 mRNA_8151 0.25 -2.0
534,100 + 16519 mRNA_8151 0.38 -0.4
534,143 + 16519 mRNA_8151 0.40 -2.3
534,479 - 16519 mRNA_8151 0.48 -0.4
534,542 + 16519 mRNA_8151 0.50 -3.5
534,558 - 16519 mRNA_8151 0.50 -4.5
534,580 + 16519 mRNA_8151 0.51 -3.9
534,631 - 16519 mRNA_8151 0.52 -2.9
535,322 - 16519 mRNA_8151 0.70 -3.6
535,452 - 16519 mRNA_8151 0.73 -3.3
535,731 + 16519 mRNA_8151 0.80 -2.9
535,892 - 16519 mRNA_8151 0.84 -3.2
535,999 - 16519 mRNA_8151 0.87 -2.8
536,164 + -0.4
536,750 + 16520 mRNA_8152 0.11 -2.4
537,125 - 16520 mRNA_8152 0.55 -2.3
537,241 - 16520 mRNA_8152 0.69 -2.9
537,333 - 16520 mRNA_8152 0.80 -1.6
537,361 - 16520 mRNA_8152 0.83 -4.1
537,465 - -1.2
537,470 - -0.1