Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8148

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8147: 16515 - HMMPfam-Enoyl-CoA hydratase/isomerase family-PF00378,SUPERFAMILY--SSF52096, at 525577 to 526736 16515 mRNA_8148: 16516 - HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961, at 527058 to 528382 16516 mRNA_8149: 16517 - KOG1198 Zinc-binding oxidoreductase, at 528930 to 530418 16517

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
526,113 + 16515 mRNA_8147 0.46 0.0
526,194 - 16515 mRNA_8147 0.53 0.0
526,352 + 16515 mRNA_8147 0.67 -0.8
526,530 - 16515 mRNA_8147 0.82 -1.8
526,683 - -2.8
526,712 + -0.5
526,812 - -0.6
526,814 - -2.4
526,835 - -2.8
526,835 - -2.4
526,835 + -0.6
526,850 + -2.7
526,860 - -0.1
527,471 - 16516 mRNA_8148 0.31 -2.0
527,721 + 16516 mRNA_8148 0.50 -1.6
528,322 - -2.7
528,327 + -2.0
528,481 + -1.1
528,481 + -1.0
528,490 + -1.2
528,498 - -1.1
528,506 - 0.4
528,513 + -3.9
528,549 + -4.2
528,599 - 0.1
528,618 - -0.9
528,625 + -0.2
528,625 + -2.7
528,646 - -3.8
528,651 + -0.1
528,657 - -2.2
528,663 + -1.1
528,671 + -2.7
528,776 + -2.0
528,777 - -1.0
528,779 + -1.8
528,785 + -3.7
528,788 - 0.5
528,817 - -1.8
528,825 + 0.4
528,827 + 0.1
528,827 + -0.6
528,828 - -2.8
528,832 + 0.5
528,841 + -1.7
528,854 + -0.1
528,854 - -0.8
528,854 - -0.4
528,856 + -1.8
528,857 + 1.0
528,864 - -2.3
528,873 + -0.5
528,897 - -1.6
528,898 - -0.1
529,124 - 16517 mRNA_8149 0.13 -1.5
529,137 + 16517 mRNA_8149 0.14 -1.2