Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8127

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8126: 16494 - BLAST putative 15-O-acetyltransferase Tri3 [Moniliophthora ..., at 479641 to 482114 16494 mRNA_8127: 16495 - BLAST CigA protein-like protein [Phycomyces blakesleean..., at 482813 to 485416 16495 mRNA_8128: 16496 - KOG0526 Nucleosome-binding factor SPN, POB3 subunit, at 485757 to 486942 16496

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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481,947 - -1.5
482,528 - -0.8
483,400 + 16495 mRNA_8127 0.23 -3.3
483,573 - 16495 mRNA_8127 0.29 0.5
483,654 + 16495 mRNA_8127 0.32 1.7
484,632 + 16495 mRNA_8127 0.70 -0.9
484,891 + 16495 mRNA_8127 0.80 -0.7
484,909 + 16495 mRNA_8127 0.80 -0.5
485,034 - 16495 mRNA_8127 0.85 -1.6
485,328 - -1.1
485,332 - -2.3
485,334 - -1.8
485,469 - -1.3
485,499 - -1.1
485,501 + -2.8
485,503 - -0.1
485,568 + -1.1
485,601 + 0.2
485,672 + -0.4
485,707 + -0.5