Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8113

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8112: 16480 - K14772 UTP20 U3 small nucleolar RNA-associated protein 20, at 440732 to 449683 16480 mRNA_8113: 16481 - HMMPfam-Thioesterase-like superfamily-PF13279,SUPERFAMILY--SSF54637, at 450205 to 451053 16481 mRNA_8114: 16482 - K09648 IMP2 mitochondrial inner membrane protease subunit 2, at 451409 to 451898 16482

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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449,891 + -1.4
449,891 + -1.8
449,894 + -0.9
449,916 + -0.1
449,922 - -0.7
450,032 - -2.6
450,035 - -1.6
450,040 - -0.9
450,042 + 0.4
450,049 + 1.1
450,054 - -0.8
450,060 + -2.3
450,064 - -2.3
450,069 + -0.2
450,071 - 0.1
450,075 - -1.4
450,076 + -3.8
450,077 + -2.2
450,089 + -2.5
450,192 - -3.6
450,212 + -2.2
450,217 + -0.9
450,222 + -2.5
450,233 + -1.6
450,370 - 16481 mRNA_8113 0.19 -2.1
450,383 + 16481 mRNA_8113 0.21 -2.4
450,392 - 16481 mRNA_8113 0.22 -2.5
450,394 + 16481 mRNA_8113 0.22 -0.6
450,826 + 16481 mRNA_8113 0.73 -0.1
450,915 - 16481 mRNA_8113 0.84 -0.7