Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8095

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8094: 16462 - K10775 PAL phenylalanine ammonia-lyase, at 403260 to 405803 16462 mRNA_8095: 16463 - K17508 PTC7, PPTC7 protein phosphatase PTC7, at 406311 to 408343 16463 mRNA_8096: 16464 - K13338 PEX1 peroxin-1, at 408811 to 412943 16464

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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405,815 - 0.4
405,871 + -4.3
405,875 + -2.0
405,875 + -2.2
405,909 - -0.5
405,913 + -2.3
405,936 + -0.5
405,942 + -1.3
405,950 + -0.0
406,015 - -1.5
406,242 + -1.7
406,532 + 16463 mRNA_8095 0.11 -1.6
406,947 - 16463 mRNA_8095 0.31 -0.8
406,974 + 16463 mRNA_8095 0.33 -2.0
407,068 + 16463 mRNA_8095 0.37 -2.2
407,255 + 16463 mRNA_8095 0.46 -1.7
407,688 - 16463 mRNA_8095 0.68 -2.7
407,816 - 16463 mRNA_8095 0.74 0.5
407,836 - 16463 mRNA_8095 0.75 -1.9
407,839 - 16463 mRNA_8095 0.75 -2.3
407,893 - 16463 mRNA_8095 0.78 -0.2
407,954 - 16463 mRNA_8095 0.81 -0.1
408,012 + 16463 mRNA_8095 0.84 -1.3
408,126 + 16463 mRNA_8095 0.89 -1.2
408,243 - -1.3
408,249 - -0.6
408,274 - -0.2
408,308 + -1.5
408,421 + -1.6
408,424 - -0.2
408,434 + -1.4
408,434 + -3.1
408,473 + 0.8
408,562 - -2.3
408,567 + -1.1
408,581 - -2.9
408,584 + -1.4
408,587 + -0.4
408,588 + -2.6
408,602 + -2.3
408,851 - -3.2
408,888 + -0.8