Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8089

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8088: 16456 - Hypothetical Protein, at 392767 to 393298 16456 mRNA_8089: 16457 - Hypothetical Protein, at 393616 to 394916 16457 mRNA_8090: 16458 - K12737 SDCCAG10 peptidyl-prolyl cis-trans isomerase SDCCAG10, at 395084 to 397372 16458

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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393,678 - -1.0
394,405 - 16457 mRNA_8089 0.61 -2.3
394,408 - 16457 mRNA_8089 0.61 -1.6
394,697 + 16457 mRNA_8089 0.83 0.5
394,745 - 16457 mRNA_8089 0.87 -1.0
394,833 + -2.1
394,969 - -1.9
394,970 - 1.0
394,976 - -3.2
395,114 + -2.8
395,162 + -2.2
395,406 - 16458 mRNA_8090 0.14 -2.5
395,566 - 16458 mRNA_8090 0.21 -0.6
395,834 + 16458 mRNA_8090 0.33 -1.4
395,861 - 16458 mRNA_8090 0.34 -2.1