Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8072

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8071: 16439 - Hypothetical Protein, at 357161 to 359241 16439 mRNA_8072: 16440 - K14684 SLC25A23S solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41, at 359607 to 361273 16440 mRNA_8073: 16441 - Hypothetical Protein, at 361679 to 362906 16441

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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358,676 - 16439 mRNA_8071 0.73 -0.6
358,979 - 16439 mRNA_8071 0.87 -0.5
358,991 + 16439 mRNA_8071 0.88 -2.1
359,119 - -0.3
359,134 + -3.9
359,162 + -0.8
359,279 + -4.1
359,286 - -0.7
359,300 - 0.3
359,420 + -2.9
359,431 - -1.4
359,431 + -0.5
359,447 - -2.2
359,698 - -1.9
359,744 + -2.5
359,748 - 0.8
360,047 - 16440 mRNA_8072 0.26 -1.7
360,146 - 16440 mRNA_8072 0.32 1.1
360,172 - 16440 mRNA_8072 0.34 -0.2
360,889 - 16440 mRNA_8072 0.77 -0.3
361,166 + -3.1
361,170 - -2.4
361,183 - -3.1
361,192 + -0.5
361,195 - -2.6
361,309 + 0.2
361,310 - -0.3
361,329 + -1.1
361,329 + -0.7
361,337 - -0.9
361,342 + -0.7
361,459 + -1.6
361,466 - -1.0
361,477 - -1.6
361,481 + -1.8
361,482 - -2.6
361,486 - -2.1
361,489 - -1.1
361,493 - -2.4
361,494 + -0.4
361,496 - -2.1
361,501 + -0.2
361,503 - -2.1
361,606 + -0.7
361,613 - -4.0
361,615 - -1.7
361,616 - -0.3
361,616 - -0.9
361,627 - -0.8
361,633 - -2.8
361,639 - -1.5
361,641 + -0.7
361,641 + 0.4
361,643 + -3.5
361,652 - -1.0
361,655 + -1.8
361,749 - 1.2
361,760 - -3.3
361,764 - -2.8
361,767 - -0.8
361,779 - -2.6
361,788 + -1.2
361,796 - -2.1
361,801 - -1.1
361,802 + 16441 mRNA_8073 0.10 -0.3
361,803 + 16441 mRNA_8073 0.10 -1.6
361,804 + 16441 mRNA_8073 0.10 -0.8
361,929 - 16441 mRNA_8073 0.20 -2.5
361,934 + 16441 mRNA_8073 0.21 -3.0
361,941 - 16441 mRNA_8073 0.21 -1.3
361,941 - 16441 mRNA_8073 0.21 1.1
361,954 + 16441 mRNA_8073 0.22 -0.6
362,107 - 16441 mRNA_8073 0.35 -2.1
362,108 - 16441 mRNA_8073 0.35 -3.0