Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8071

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8070: 16438 - KOG2744 DNA-binding proteins Bright/BRCAA1/RBP1 and related proteins containing BRIGHT domain, at 352971 to 356378 16438 mRNA_8071: 16439 - Hypothetical Protein, at 357161 to 359241 16439 mRNA_8072: 16440 - K14684 SLC25A23S solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41, at 359607 to 361273 16440

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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356,185 - -2.3
356,224 + -1.6
356,228 + -0.8
356,331 - -3.7
356,336 + -2.6
356,344 + -0.2
356,361 + -0.3
356,372 - -2.0
356,373 - 0.1
356,374 - -0.2
356,389 + -2.9
356,390 + -0.1
356,411 - -0.2
356,431 - -0.2
356,460 + -0.9
356,492 + -2.8
356,492 + 0.4
356,499 + 0.4
356,506 + -4.4
356,533 + 0.6
356,534 - -0.4
356,597 - -0.6
356,608 + -1.5
356,611 - -1.1
356,613 - 0.0
356,614 + -0.4
356,614 + -2.7
356,614 - -1.7
356,618 + -0.4
356,620 + -1.1
356,626 + -0.1
356,626 + -1.3
356,628 - -0.0
356,630 - 0.6
356,633 - 0.1
356,636 + -1.9
356,639 - -0.1
356,658 - -3.2
356,764 - -3.2
356,852 - 0.4
356,866 - -0.2
356,886 - -0.3
356,909 + -1.6
356,916 + -1.3
356,918 - -2.3
356,934 + -1.8
356,934 - -2.1
356,935 + -3.1
356,936 - -3.1
356,949 - -3.4
356,950 - -0.5
356,967 - -2.7
356,997 + -1.7
357,026 + -1.9
357,077 + 0.9
357,128 - 0.5
357,223 + -0.0
357,808 + 16439 mRNA_8071 0.31 -0.6
357,951 + 16439 mRNA_8071 0.38 -0.1
358,118 + 16439 mRNA_8071 0.46 -2.6
358,528 + 16439 mRNA_8071 0.66 0.2
358,538 - 16439 mRNA_8071 0.66 -0.7
358,676 - 16439 mRNA_8071 0.73 -0.6
358,979 - 16439 mRNA_8071 0.87 -0.5
358,991 + 16439 mRNA_8071 0.88 -2.1
359,119 - -0.3
359,134 + -3.9
359,162 + -0.8
359,279 + -4.1
359,286 - -0.7
359,300 - 0.3
359,420 + -2.9
359,431 - -1.4
359,431 + -0.5
359,447 - -2.2
359,698 - -1.9
359,744 + -2.5
359,748 - 0.8
360,047 - 16440 mRNA_8072 0.26 -1.7
360,146 - 16440 mRNA_8072 0.32 1.1
360,172 - 16440 mRNA_8072 0.34 -0.2