Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8049

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8048: 16416 - Hypothetical Protein, at 299465 to 299980 16416 mRNA_8049: 16417 - SUPERFAMILY--SSF52047, at 300681 to 303799 16417 mRNA_8050: 16418 - K02943 RP-LP2, RPLP2 large subunit ribosomal protein LP2, at 304336 to 304986 16418

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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299,950 - 0.1
300,232 - -0.8
300,348 - -2.4
300,564 - -0.4
301,299 + 16417 mRNA_8049 0.20 -1.7
301,318 + 16417 mRNA_8049 0.20 1.6
301,449 + 16417 mRNA_8049 0.25 -2.1
301,486 + 16417 mRNA_8049 0.26 -2.6
301,495 + 16417 mRNA_8049 0.26 -1.9
301,578 - 16417 mRNA_8049 0.29 -2.1
301,751 - 16417 mRNA_8049 0.34 -0.9
301,764 + 16417 mRNA_8049 0.35 2.7
301,778 + 16417 mRNA_8049 0.35 -2.0
301,885 - 16417 mRNA_8049 0.39 -0.7
301,889 + 16417 mRNA_8049 0.39 -1.3
301,897 + 16417 mRNA_8049 0.39 -0.4
302,196 - 16417 mRNA_8049 0.49 -2.8
302,231 + 16417 mRNA_8049 0.50 -2.0
302,369 + 16417 mRNA_8049 0.54 -1.4
302,506 - 16417 mRNA_8049 0.59 -1.4
302,651 + 16417 mRNA_8049 0.63 -0.0
302,779 - 16417 mRNA_8049 0.67 -3.3
302,978 + 16417 mRNA_8049 0.74 -0.3
303,522 + 0.9
303,535 + -0.4
303,662 - 0.2
303,719 + -0.7
303,831 - -0.1
303,969 - -1.1
303,971 - -2.0
304,027 - -2.6
304,044 + 0.8
304,080 - -0.7
304,121 + -3.0
304,125 + -0.5
304,294 + -2.6