Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8026

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8025: 16393 - KOG0118 FOG RRM domain, at 235031 to 239261 16393 mRNA_8026: 16394 - K03515 REV1 DNA repair protein REV1, at 239573 to 243561 16394 mRNA_8027: 16395 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 243826 to 244717 16395

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
238,894 - -0.3
238,928 - -1.9
239,064 + 2.0
239,345 + -1.8
239,352 + 0.5
239,353 + -2.0
239,357 + -3.5
239,374 + -0.9
239,484 + -1.2
239,490 - -2.7
239,490 - -4.2
239,496 - -2.5
239,507 - -1.2
239,511 - -0.4
239,525 + -4.4
239,534 + -3.5
239,631 - -0.6
239,678 + -2.6
239,698 + -1.8
239,837 + -0.4
239,842 + -1.7
239,843 + 0.5
239,848 - -2.3
239,849 + -2.6
239,866 - -1.2
239,979 + 16394 mRNA_8026 0.10 -2.2
240,060 + 16394 mRNA_8026 0.12 -3.8
240,092 + 16394 mRNA_8026 0.13 -0.4
240,125 - 16394 mRNA_8026 0.14 1.0
240,263 - 16394 mRNA_8026 0.17 0.9
240,268 + 16394 mRNA_8026 0.17 1.7
240,402 - 16394 mRNA_8026 0.21 -1.7
240,540 - 16394 mRNA_8026 0.24 -1.9
240,860 - 16394 mRNA_8026 0.32 -2.6
241,592 + 16394 mRNA_8026 0.51 -2.8
241,676 - 16394 mRNA_8026 0.53 -1.0
241,723 - 16394 mRNA_8026 0.54 -1.5
241,761 - 16394 mRNA_8026 0.55 0.8
241,769 + 16394 mRNA_8026 0.55 -0.9
241,863 + 16394 mRNA_8026 0.57 -1.3
241,904 + 16394 mRNA_8026 0.58 -0.7
241,958 - 16394 mRNA_8026 0.60 1.6
241,958 - 16394 mRNA_8026 0.60 -1.7
242,232 + 16394 mRNA_8026 0.67 -1.1
242,276 - 16394 mRNA_8026 0.68 -3.7
242,360 - 16394 mRNA_8026 0.70 -0.9
242,445 - 16394 mRNA_8026 0.72 -1.1
242,591 - 16394 mRNA_8026 0.76 -3.1
242,713 - 16394 mRNA_8026 0.79 -2.9
242,776 - 16394 mRNA_8026 0.80 -1.1
242,795 + 16394 mRNA_8026 0.81 -0.9
242,890 - 16394 mRNA_8026 0.83 -1.8
243,022 - 16394 mRNA_8026 0.86 1.4
243,065 - 16394 mRNA_8026 0.88 0.8
243,107 - 16394 mRNA_8026 0.89 0.0
243,115 + 16394 mRNA_8026 0.89 -2.2
243,180 + -0.8
243,214 + -1.1
243,245 - -0.9
243,255 + -0.6
243,320 + -1.6
243,341 + -2.7
243,356 - -0.7
243,503 - -1.7
243,505 + -0.9
243,515 - -2.0
243,553 + -1.5
243,659 + -0.4
243,827 - -2.3
243,974 - 16395 mRNA_8027 0.17 -3.6
243,976 + 16395 mRNA_8027 0.17 -2.1
243,978 - 16395 mRNA_8027 0.17 -0.3
244,011 - 16395 mRNA_8027 0.21 -0.8
244,081 - 16395 mRNA_8027 0.29 -0.6
244,106 - 16395 mRNA_8027 0.31 -2.2
244,141 - 16395 mRNA_8027 0.35 -0.2