Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7996

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7995: 16363 - Hypothetical Protein, at 173572 to 173952 16363 mRNA_7996: 16364 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 174133 to 175085 16364 mRNA_7997: 16365 - Hypothetical Protein, at 175360 to 176282 16365

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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173,259 + -0.4
173,318 + 0.9
173,356 + -0.4
173,361 - 0.0
173,374 - -2.0
173,399 + -1.3
173,438 - -0.6
173,477 - -2.1
173,479 - -0.4
173,483 + -1.4
173,490 + 0.4
173,510 + -0.2
173,532 - -2.1
173,576 + -1.6
173,576 + -0.2
173,596 + 0.6
173,619 - 16363 mRNA_7995 0.12 -0.2
173,631 - 16363 mRNA_7995 0.15 0.1
173,788 - 16363 mRNA_7995 0.57 -1.5
173,840 - 16363 mRNA_7995 0.70 -1.4
174,058 + -0.2
174,093 - -0.3
174,158 - -2.8
174,270 - 16364 mRNA_7996 0.14 -4.1
174,359 + 16364 mRNA_7996 0.24 -2.7
174,502 + 16364 mRNA_7996 0.39 -0.2
174,528 + 16364 mRNA_7996 0.41 -1.9
174,584 + 16364 mRNA_7996 0.47 0.1
174,675 - 16364 mRNA_7996 0.57 0.0
174,982 + 16364 mRNA_7996 0.89 -2.1
174,989 + 16364 mRNA_7996 0.90 -0.1
175,030 + -3.0
175,118 - 0.2
175,122 - -0.0
175,130 + -0.7
175,136 - -3.8
175,424 - -1.5
175,584 - 16365 mRNA_7997 0.24 -1.1
175,597 + 16365 mRNA_7997 0.26 -0.1
175,688 + 16365 mRNA_7997 0.36 -1.1
175,696 + 16365 mRNA_7997 0.36 -1.7
175,696 + 16365 mRNA_7997 0.36 -0.5
175,865 - 16365 mRNA_7997 0.55 -0.0
176,074 - 16365 mRNA_7997 0.77 -1.8