Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7970

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7969: 16337 - Hypothetical Protein, at 114657 to 115244 16337 mRNA_7970: 16338 - SUPERFAMILY--SSF144232, at 115514 to 116661 16338 mRNA_7971: 16339 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 116954 to 120210 16339

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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114,530 + -2.1
114,531 + -1.5
114,647 + -1.3
114,651 - -1.0
114,724 - 16337 mRNA_7969 0.11 -2.2
114,731 + 16337 mRNA_7969 0.13 -0.3
114,760 - 16337 mRNA_7969 0.18 -2.6
114,840 - 16337 mRNA_7969 0.31 -0.8
114,980 - 16337 mRNA_7969 0.55 -1.3
114,998 - 16337 mRNA_7969 0.58 -1.6
115,000 - 16337 mRNA_7969 0.58 -1.7
115,078 - 16337 mRNA_7969 0.72 0.7
115,087 - 16337 mRNA_7969 0.73 -3.2
115,087 + 16337 mRNA_7969 0.73 -2.6
115,090 - 16337 mRNA_7969 0.74 -1.6
115,093 - 16337 mRNA_7969 0.74 -2.8
115,182 + 16337 mRNA_7969 0.89 -2.4
115,234 + -4.8
115,284 - -1.1
115,306 + -0.9
115,309 - -0.6
115,534 + 0.8
115,698 + 16338 mRNA_7970 0.16 -2.0
115,717 - 16338 mRNA_7970 0.18 -0.1
115,819 - 16338 mRNA_7970 0.27 0.2
115,839 + 16338 mRNA_7970 0.28 -2.4
115,966 - 16338 mRNA_7970 0.39 -3.4
116,048 + 16338 mRNA_7970 0.47 -1.7
116,051 - 16338 mRNA_7970 0.47 -1.3
116,114 + 16338 mRNA_7970 0.52 -0.1
116,117 + 16338 mRNA_7970 0.53 -0.3
116,135 - 16338 mRNA_7970 0.54 -0.9
116,170 + 16338 mRNA_7970 0.57 -1.6
116,185 - 16338 mRNA_7970 0.58 -2.7
116,267 + 16338 mRNA_7970 0.66 -1.0
116,290 - 16338 mRNA_7970 0.68 -1.9
116,404 + 16338 mRNA_7970 0.78 -3.6
116,430 - 16338 mRNA_7970 0.80 -1.2
116,431 + 16338 mRNA_7970 0.80 -1.1
116,437 - 16338 mRNA_7970 0.80 -3.4
116,440 - 16338 mRNA_7970 0.81 -2.0
116,488 + 16338 mRNA_7970 0.85 0.6
116,586 - -0.9
116,594 - -1.8
116,736 + -2.2
116,793 + 0.5
116,797 - -1.4
117,105 + -3.7
117,159 + 0.7
117,226 - -2.7
117,229 - -1.8
117,247 - -1.0