Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7964

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7963: 16331 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 106769 to 107651 16331 mRNA_7964: 16332 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 108075 to 108950 16332 mRNA_7965: 16333 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 109378 to 110240 16333

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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107,263 + 16331 mRNA_7963 0.56 -0.7
107,420 + 16331 mRNA_7963 0.74 -4.0
107,430 + 16331 mRNA_7963 0.75 -3.3
107,451 - 16331 mRNA_7963 0.77 -2.1
107,467 + 16331 mRNA_7963 0.79 -2.3
107,604 + -0.1
107,618 - -0.3
107,635 + -1.0
107,886 + -1.9
107,910 - -1.2
107,916 + -0.3
108,012 - -1.3
108,015 - -1.1
108,019 - 0.7
108,178 + 16332 mRNA_7964 0.12 -0.5
108,345 - 16332 mRNA_7964 0.31 -0.3
108,370 + 16332 mRNA_7964 0.34 0.0
108,552 + 16332 mRNA_7964 0.54 -2.0
108,585 - 16332 mRNA_7964 0.58 -1.0
108,623 + 16332 mRNA_7964 0.63 -2.6
108,713 + 16332 mRNA_7964 0.73 -0.6
108,748 - 16332 mRNA_7964 0.77 -2.7
108,863 + -4.7
108,868 - -0.0
108,917 - -0.4
108,933 + -1.1
108,988 + -0.5
108,988 + -0.9
109,049 + -1.9
109,158 + -1.1
109,451 + -2.4
109,515 - 16333 mRNA_7965 0.16 -0.5
109,619 - 16333 mRNA_7965 0.28 -1.0
109,670 + 16333 mRNA_7965 0.34 -3.0
109,752 + 16333 mRNA_7965 0.43 0.5
109,758 - 16333 mRNA_7965 0.44 -0.2
109,771 + 16333 mRNA_7965 0.46 -1.5
109,913 + 16333 mRNA_7965 0.62 -3.2
109,920 + 16333 mRNA_7965 0.63 -3.3
109,950 - 16333 mRNA_7965 0.66 -1.3