Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7959

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7958: 16326 - Hypothetical Protein, at 100793 to 101343 16326 mRNA_7959: 16327 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 101739 to 102560 16327 mRNA_7960: 16328 - SUPERFAMILY--SSF144232, at 102805 to 103919 16328

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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100,759 - -2.0
101,390 - -2.9
101,438 - -2.6
101,548 + -2.3
101,595 - 0.1
101,697 + -2.0
101,699 + 0.1
101,707 + -0.9
101,834 + 16327 mRNA_7959 0.12 -2.0
101,905 + 16327 mRNA_7959 0.20 -1.3
101,907 - 16327 mRNA_7959 0.20 -1.3
102,169 - 16327 mRNA_7959 0.52 -1.5
102,349 - 16327 mRNA_7959 0.74 -1.4
102,457 + 16327 mRNA_7959 0.87 -3.4
102,497 - -1.9
102,660 - -1.0
102,661 + -1.5
102,739 + -0.5
102,745 + -3.1
102,748 - -3.0
102,748 - -1.9
102,752 + -0.6
102,776 + -0.3
102,956 + 16328 mRNA_7960 0.14 -2.1
103,021 - 16328 mRNA_7960 0.19 -2.1
103,060 + 16328 mRNA_7960 0.23 -0.7
103,094 + 16328 mRNA_7960 0.26 -0.7
103,249 + 16328 mRNA_7960 0.40 -0.1
103,249 + 16328 mRNA_7960 0.40 -2.5
103,297 + 16328 mRNA_7960 0.44 -1.0
103,300 + 16328 mRNA_7960 0.44 -2.0
103,303 + 16328 mRNA_7960 0.45 -0.7
103,326 - 16328 mRNA_7960 0.47 -3.1