Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7955

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7954: 16322 - K01282 E3.4.14.- dipeptidyl aminopeptidase, at 88821 to 92965 16322 mRNA_7955: 16323 - K00128 ALDH aldehyde dehydrogenase (NAD+), at 93400 to 95869 16323 mRNA_7956: 16324 - K03146 THI4, THI1 thiamine thiazole synthase, at 96703 to 99029 16324

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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92,797 + -0.5
92,979 - -0.5
93,326 + -0.1
93,335 - -0.2
93,338 + -1.8
93,342 - -1.8
93,347 + -0.8
93,348 - -1.0
93,349 + -2.0
93,349 + 0.1
93,524 - -2.1
93,893 - 16323 mRNA_7955 0.20 -2.2
93,956 - 16323 mRNA_7955 0.23 -1.9
94,283 - 16323 mRNA_7955 0.36 -2.1
94,373 - 16323 mRNA_7955 0.39 -1.7
94,382 - 16323 mRNA_7955 0.40 -0.9
94,430 - 16323 mRNA_7955 0.42 -3.1
94,691 - 16323 mRNA_7955 0.52 -2.1
95,123 - 16323 mRNA_7955 0.70 -0.5
95,165 - 16323 mRNA_7955 0.71 -3.9
95,254 - 16323 mRNA_7955 0.75 -4.3
95,257 + 16323 mRNA_7955 0.75 -1.8
95,534 - 16323 mRNA_7955 0.86 -1.9
95,573 + 16323 mRNA_7955 0.88 -1.3
95,841 - -1.6
95,858 - -0.7
96,009 - -1.8
96,072 - -2.2
96,083 + -1.8
96,179 + -2.3
96,285 - -0.2
96,298 + -0.1
96,473 + 0.4
96,497 + -0.9
96,513 + -0.9
96,533 - -2.8
96,538 + -2.0
96,554 - -2.4
96,567 - -0.7
96,574 + -0.4
96,580 - -2.3
96,590 - 0.8
96,605 + -1.0
96,616 + -2.6
96,631 + -1.7
96,633 - -0.2
96,641 - -1.1