Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7954

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7953: 16321 - K13667 RUMI, KTELC1 protein glucosyltransferase, at 85721 to 88276 16321 mRNA_7954: 16322 - K01282 E3.4.14.- dipeptidyl aminopeptidase, at 88821 to 92965 16322 mRNA_7955: 16323 - K00128 ALDH aldehyde dehydrogenase (NAD+), at 93400 to 95869 16323

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
87,867 - 16321 mRNA_7953 0.84 -1.0
87,958 - 16321 mRNA_7953 0.88 -2.1
88,107 + -2.6
88,246 - -3.5
88,266 - -2.4
88,389 + -1.2
88,443 - -0.7
88,450 + -0.5
88,471 - -1.4
88,501 + -0.1
88,568 - -1.4
88,591 + -0.8
88,592 + -1.9
88,593 - -0.9
88,593 - -1.9
88,605 + -1.5
88,625 + -2.3
88,639 + 0.3
88,705 - 1.0
88,712 + 0.0
88,781 + -0.1
88,873 + -1.1
88,878 + -1.4
88,880 - -1.7
88,896 + -0.5
88,929 + -0.8
88,930 + -0.1
89,003 + -2.2
89,013 + -0.1
89,040 + -1.1
89,180 - 0.1
89,197 - -0.9
89,558 + 16322 mRNA_7954 0.18 -4.6
89,664 + 16322 mRNA_7954 0.20 -1.5
89,790 + 16322 mRNA_7954 0.23 -4.2
89,921 + 16322 mRNA_7954 0.27 -1.2
90,027 - 16322 mRNA_7954 0.29 -2.5
90,250 - 16322 mRNA_7954 0.34 -1.7
90,617 + 16322 mRNA_7954 0.43 -0.5
90,784 + 16322 mRNA_7954 0.47 -1.9
90,960 - 16322 mRNA_7954 0.52 -0.5
90,964 + 16322 mRNA_7954 0.52 -2.8
91,083 + 16322 mRNA_7954 0.55 -1.4
91,210 - 16322 mRNA_7954 0.58 1.1
91,228 + 16322 mRNA_7954 0.58 -1.1
91,317 - 16322 mRNA_7954 0.60 -3.6
91,651 + 16322 mRNA_7954 0.68 -3.3
91,672 + 16322 mRNA_7954 0.69 -1.2
91,988 + 16322 mRNA_7954 0.76 -2.7
92,096 - 16322 mRNA_7954 0.79 -1.5
92,142 - 16322 mRNA_7954 0.80 -3.6
92,215 - 16322 mRNA_7954 0.82 -2.4
92,246 + 16322 mRNA_7954 0.83 -1.7
92,797 + -0.5
92,979 - -0.5
93,326 + -0.1
93,335 - -0.2
93,338 + -1.8
93,342 - -1.8
93,347 + -0.8
93,348 - -1.0
93,349 + -2.0
93,349 + 0.1
93,524 - -2.1
93,893 - 16323 mRNA_7955 0.20 -2.2
93,956 - 16323 mRNA_7955 0.23 -1.9