Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7950

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7949: 16317 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 75609 to 76482 16317 mRNA_7950: 16318 - K04802 PCNA proliferating cell nuclear antigen, at 76989 to 79257 16318 mRNA_7951: 16319 - K09527 DNAJC7 DnaJ homolog subfamily C member 7, at 79808 to 82314 16319

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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76,096 - 16317 mRNA_7949 0.56 -1.3
76,104 + 16317 mRNA_7949 0.57 -3.4
76,182 + 16317 mRNA_7949 0.66 -2.5
76,241 - 16317 mRNA_7949 0.72 -1.8
76,265 - 16317 mRNA_7949 0.75 -2.6
76,280 - 16317 mRNA_7949 0.77 -1.0
76,590 - -1.7
76,622 - -0.7
76,812 - -1.9
76,915 - -2.2
77,990 + 16318 mRNA_7950 0.44 1.9
79,287 + -1.6
79,343 - -1.3
79,343 - -1.0
79,348 + -0.8
79,394 - -0.8
79,400 + 0.9
79,405 - -0.8
79,409 + -2.4
79,494 + -3.3
79,679 + -2.6
79,798 + -0.4
79,925 - 2.1
79,931 + -2.5
80,080 + 16319 mRNA_7951 0.11 0.1