Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7938

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7937: 16305 - KOG0550 Molecular chaperone (DnaJ superfamily), at 53529 to 55424 16305 mRNA_7938: 16306 - Hypothetical Protein, at 55876 to 58183 16306 mRNA_7939: 16307 - Hypothetical Protein, at 58388 to 59651 16307

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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55,106 + 16305 mRNA_7937 0.83 -0.9
55,211 - 16305 mRNA_7937 0.89 -1.4
55,524 - 0.2
55,594 - -1.3
55,602 - -1.1
55,616 + -1.6
55,740 + -2.6
55,744 - -1.9
55,792 - -3.1
56,076 + -2.3
56,081 - -1.1
56,229 - 16306 mRNA_7938 0.15 -3.4
56,534 + 16306 mRNA_7938 0.29 -2.5
56,822 - 16306 mRNA_7938 0.41 -1.3
56,829 - 16306 mRNA_7938 0.41 -1.2
57,261 - 16306 mRNA_7938 0.60 -2.8
57,264 + 16306 mRNA_7938 0.60 -3.4
57,333 - 16306 mRNA_7938 0.63 -0.6
57,338 - 16306 mRNA_7938 0.63 -3.0
57,544 + 16306 mRNA_7938 0.72 -2.9
57,555 + 16306 mRNA_7938 0.73 -1.9
57,579 - 16306 mRNA_7938 0.74 -1.5
57,638 + 16306 mRNA_7938 0.76 -0.8
57,641 - 16306 mRNA_7938 0.76 -0.7
57,944 + 16306 mRNA_7938 0.90 -2.2
58,102 - -0.4
58,157 - -2.7
58,288 - -2.3
58,302 + -0.4
58,321 - -0.8
58,341 + -0.9
58,503 + -0.1
58,576 + 16307 mRNA_7939 0.15 -0.4