Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7929

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7928: 16296 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 39408 to 40571 16296 mRNA_7929: 16297 - K02013 ABC.FEV.A iron complex transport system ATP-binding protein, at 40683 to 43204 16297 mRNA_7930: 16298 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 43652 to 44554 16298

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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39,721 - 16296 mRNA_7928 0.27 0.2
39,732 - 16296 mRNA_7928 0.28 -1.7
39,791 + 16296 mRNA_7928 0.33 -0.1
39,807 - 16296 mRNA_7928 0.34 -1.0
39,890 + 16296 mRNA_7928 0.41 -1.5
39,893 - 16296 mRNA_7928 0.42 -0.6
39,893 - 16296 mRNA_7928 0.42 -4.0
39,893 - 16296 mRNA_7928 0.42 -1.1
39,957 + 16296 mRNA_7928 0.47 -2.5
39,992 - 16296 mRNA_7928 0.50 -0.4
40,077 + 16296 mRNA_7928 0.57 -2.4
40,129 + 16296 mRNA_7928 0.62 -0.9
40,146 + 16296 mRNA_7928 0.63 0.7
40,315 + 16296 mRNA_7928 0.78 -0.2
40,323 - 16296 mRNA_7928 0.79 -0.7
40,359 - 16296 mRNA_7928 0.82 -3.2
40,400 - 16296 mRNA_7928 0.85 -0.5
40,417 + 16296 mRNA_7928 0.87 -1.4
40,475 + -2.0
40,511 + -1.3
40,678 - -0.2
40,707 + -0.1
40,810 - -2.5
40,839 + -2.7
40,981 + 16297 mRNA_7929 0.12 -1.4
40,984 - 16297 mRNA_7929 0.12 -0.9
40,985 + 16297 mRNA_7929 0.12 -0.6
41,215 - 16297 mRNA_7929 0.21 -4.6
41,234 - 16297 mRNA_7929 0.22 -1.3
41,240 + 16297 mRNA_7929 0.22 -1.9
41,243 - 16297 mRNA_7929 0.22 -0.6
41,243 - 16297 mRNA_7929 0.22 -0.9
41,267 - 16297 mRNA_7929 0.23 -1.3
41,299 + 16297 mRNA_7929 0.24 -2.3
41,354 + 16297 mRNA_7929 0.27 -2.0
41,355 - 16297 mRNA_7929 0.27 -0.6
41,370 + 16297 mRNA_7929 0.27 -1.2
41,486 - 16297 mRNA_7929 0.32 -0.6
41,514 - 16297 mRNA_7929 0.33 -2.6
41,661 + 16297 mRNA_7929 0.39 -2.1
41,662 - 16297 mRNA_7929 0.39 0.5
41,673 + 16297 mRNA_7929 0.39 -0.8
41,692 + 16297 mRNA_7929 0.40 -2.8
41,704 + 16297 mRNA_7929 0.40 -1.2
41,716 + 16297 mRNA_7929 0.41 -0.7
42,000 - 16297 mRNA_7929 0.52 -3.6
42,251 - 16297 mRNA_7929 0.62 -3.0
42,251 + 16297 mRNA_7929 0.62 -1.9
42,251 + 16297 mRNA_7929 0.62 -2.0
42,254 - 16297 mRNA_7929 0.62 -3.4
42,254 - 16297 mRNA_7929 0.62 0.8
42,290 + 16297 mRNA_7929 0.64 -2.4
42,385 - 16297 mRNA_7929 0.67 -1.4
42,397 + 16297 mRNA_7929 0.68 0.1
42,438 + 16297 mRNA_7929 0.70 -0.6
42,572 - 16297 mRNA_7929 0.75 -3.3
42,704 + 16297 mRNA_7929 0.80 -2.1
42,819 - 16297 mRNA_7929 0.85 -2.2
42,827 - 16297 mRNA_7929 0.85 -2.3
42,849 + 16297 mRNA_7929 0.86 -0.2
42,849 + 16297 mRNA_7929 0.86 0.5
42,863 + 16297 mRNA_7929 0.86 -0.5
43,150 + -3.2
43,229 - -0.3
43,286 + -2.8
43,306 - -0.4
43,447 - -1.6
43,568 - 0.1
43,588 + -0.5
43,588 + 0.0
43,589 - -0.0
43,744 + 16298 mRNA_7930 0.10 0.7
43,812 - 16298 mRNA_7930 0.18 -0.1
43,823 + 16298 mRNA_7930 0.19 -1.1
44,011 + 16298 mRNA_7930 0.40 -1.1
44,018 + 16298 mRNA_7930 0.41 -0.6
44,022 - 16298 mRNA_7930 0.41 -2.6
44,038 + 16298 mRNA_7930 0.43 0.0
44,116 + 16298 mRNA_7930 0.51 -3.7
44,171 - 16298 mRNA_7930 0.57 -2.2
44,181 + 16298 mRNA_7930 0.59 -0.8
44,187 - 16298 mRNA_7930 0.59 0.6