Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7916

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7915: 16283 - SUPERFAMILY--SSF51445, at 12129 to 14300 16283 mRNA_7916: 16284 - K08683 HSD17B10 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxy-2-methylbutyryl-CoA dehydrogenase, at 14684 to 15975 16284 mRNA_7917: 16285 - K18477 RMT2 type IV protein arginine methyltransferase, at 16350 to 18077 16285

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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13,950 - 16283 mRNA_7915 0.84 0.6
13,953 + 16283 mRNA_7915 0.84 0.6
14,353 - -1.2
14,370 - -0.7
14,410 + -1.0
14,532 - -0.1
14,689 + -1.5
14,696 - -2.9
14,836 - 16284 mRNA_7916 0.12 -0.9
14,843 + 16284 mRNA_7916 0.12 -1.9
15,322 - 16284 mRNA_7916 0.49 1.5
15,555 + 16284 mRNA_7916 0.67 -0.8
15,576 + 16284 mRNA_7916 0.69 1.3
15,823 - 16284 mRNA_7916 0.88 -0.8
15,852 + -0.5
16,151 - -0.7
16,153 - -1.2
16,182 + -1.8
16,184 - -3.2
16,282 - -1.4
16,291 - -0.9
16,291 - -0.5
16,303 + -1.6
16,307 - -4.6
16,309 + -1.4
16,310 - -1.4
16,314 + -0.8
16,317 + -0.5
16,325 - -0.2
16,344 - 1.6
16,360 - -0.7
16,446 - -3.3
16,663 - 16285 mRNA_7917 0.18 -1.3