Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7849

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7849: 16217 - KOG1529 Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase, at 1213713 to 1217281 16217 mRNA_7850: 16218 - KOG3291 Ribosomal protein S7, at 1218272 to 1218817 16218

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,213,048 + -2.2
1,213,279 - -2.7
1,213,339 + -2.0
1,213,488 + -1.5
1,213,505 - -2.8
1,213,560 - 0.4
1,213,574 - -0.7
1,213,589 + -3.0
1,213,617 + -0.5
1,213,737 + 0.1
1,213,751 + -3.7
1,213,909 + -2.3
1,213,964 - 0.7
1,214,009 - 0.5
1,214,108 - 16217 mRNA_7849 0.11 -1.4
1,214,150 - 16217 mRNA_7849 0.12 -1.8
1,214,328 - 16217 mRNA_7849 0.17 -0.9
1,214,342 + 16217 mRNA_7849 0.18 -0.9
1,214,353 + 16217 mRNA_7849 0.18 0.3
1,214,357 + 16217 mRNA_7849 0.18 -1.4
1,214,375 - 16217 mRNA_7849 0.19 -0.2
1,214,401 + 16217 mRNA_7849 0.19 -2.0
1,214,473 - 16217 mRNA_7849 0.21 -2.0
1,214,474 - 16217 mRNA_7849 0.21 0.1
1,214,483 + 16217 mRNA_7849 0.22 -2.7
1,214,485 + 16217 mRNA_7849 0.22 0.8
1,214,551 + 16217 mRNA_7849 0.23 0.4
1,214,604 + 16217 mRNA_7849 0.25 -2.9
1,214,643 - 16217 mRNA_7849 0.26 0.0
1,214,744 + 16217 mRNA_7849 0.29 -1.4
1,214,825 - 16217 mRNA_7849 0.31 -0.3
1,214,911 - 16217 mRNA_7849 0.34 -0.5
1,215,212 + 16217 mRNA_7849 0.42 -0.5
1,215,296 - 16217 mRNA_7849 0.44 -0.6
1,215,302 + 16217 mRNA_7849 0.45 -1.6
1,215,475 - 16217 mRNA_7849 0.49 0.2
1,215,647 + 16217 mRNA_7849 0.54 0.1
1,215,663 - 16217 mRNA_7849 0.55 -1.6
1,215,927 + 16217 mRNA_7849 0.62 0.5
1,215,988 - 16217 mRNA_7849 0.64 -1.9
1,216,165 - 16217 mRNA_7849 0.69 -1.5
1,216,521 + 16217 mRNA_7849 0.79 -0.5
1,216,969 + -1.7
1,217,484 + -1.2
1,217,529 - -0.7
1,217,690 + 0.2
1,217,761 + -1.3
1,218,014 - -0.5