Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7846

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7845: 16213 - K14154 THI6 thiamine-phosphate diphosphorylase / hydroxyethylthiazole kinase, at 1199840 to 1202125 16213 mRNA_7846: 16214 - K04460 PPP5C serine/threonine-protein phosphatase 5, at 1202392 to 1204902 16214

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,201,416 - 16213 mRNA_7845 0.69 -2.0
1,201,443 + 16213 mRNA_7845 0.70 -2.4
1,201,479 - 16213 mRNA_7845 0.72 -0.5
1,201,479 + 16213 mRNA_7845 0.72 -1.2
1,201,558 - 16213 mRNA_7845 0.75 -0.8
1,202,157 + -0.1
1,202,323 - -0.3
1,202,330 + 0.1
1,202,401 - 0.4
1,202,637 + -1.1
1,202,738 + 16214 mRNA_7846 0.14 -3.4
1,202,750 - 16214 mRNA_7846 0.14 0.1
1,202,759 + 16214 mRNA_7846 0.15 -0.3
1,202,760 - 16214 mRNA_7846 0.15 -1.3
1,202,852 + 16214 mRNA_7846 0.18 -2.0
1,202,892 + 16214 mRNA_7846 0.20 -0.8
1,202,894 - 16214 mRNA_7846 0.20 -1.4
1,203,012 - 16214 mRNA_7846 0.25 -3.2
1,203,473 - 16214 mRNA_7846 0.43 -1.4
1,203,938 - 16214 mRNA_7846 0.62 -1.4
1,204,184 + 16214 mRNA_7846 0.71 -2.7
1,204,340 + 16214 mRNA_7846 0.78 0.1
1,204,504 - 16214 mRNA_7846 0.84 -2.7
1,204,511 + 16214 mRNA_7846 0.84 -3.4
1,204,732 + -1.9
1,204,804 + -1.6
1,204,907 + -1.9
1,204,940 + -0.9
1,204,958 + 0.6
1,205,063 - -0.6
1,205,072 - -0.3
1,205,096 - 0.9
1,205,102 + -2.2
1,205,105 - -1.5
1,205,109 + -2.4
1,205,114 + -0.5
1,205,122 - -1.6
1,205,140 - -0.7
1,205,144 + -2.3
1,205,145 + -0.1
1,205,168 - -1.3
1,205,174 - -1.5
1,205,189 - -3.2
1,205,192 + 0.5
1,205,198 - -2.5
1,205,204 - -0.6
1,205,208 - -0.9
1,205,210 - -2.1
1,205,211 + 0.3
1,205,215 - -3.0
1,205,222 + -1.8
1,205,326 + -2.4
1,205,364 + -3.1
1,205,367 - -1.2
1,205,384 - -1.6
1,205,386 + -1.7
1,205,391 + 0.6
1,205,405 - -0.7
1,205,406 - -1.1
1,205,412 - -3.1
1,205,415 - 0.4
1,205,416 + -2.3
1,205,417 + -2.7
1,205,451 - -0.6
1,205,565 - -2.5
1,205,573 + -0.5
1,205,700 - -2.2
1,205,830 + -0.2
1,205,837 - -3.1
1,205,846 + -2.1
1,205,849 - -1.2
1,205,862 + -1.0
1,205,862 + -5.0