Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7805

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7804: 16172 - KOG1204 Predicted dehydrogenase, at 1111520 to 1112833 16172 mRNA_7805: 16173 - K12389 BTS, CLN3 battenin, at 1113037 to 1115028 16173 mRNA_7806: 16174 - Hypothetical Protein, at 1115383 to 1115856 16174

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,112,049 - 16172 mRNA_7804 0.40 -2.6
1,112,354 - 16172 mRNA_7804 0.63 -0.5
1,112,463 + 16172 mRNA_7804 0.72 -0.8
1,112,466 + 16172 mRNA_7804 0.72 -1.3
1,112,914 - -1.7
1,112,933 + -0.9
1,112,936 - -2.1
1,112,942 - -0.0
1,112,961 + -1.7
1,113,548 + 16173 mRNA_7805 0.26 -0.6
1,113,651 - 16173 mRNA_7805 0.31 -1.7
1,113,676 + 16173 mRNA_7805 0.32 -0.5
1,113,828 + 16173 mRNA_7805 0.40 -2.6
1,113,846 - 16173 mRNA_7805 0.41 -1.6
1,114,088 - 16173 mRNA_7805 0.53 -0.2
1,114,520 - 16173 mRNA_7805 0.74 -1.2
1,114,817 - 16173 mRNA_7805 0.89 -2.2
1,114,939 - -1.0
1,114,939 - -1.8
1,115,061 - 1.4
1,115,094 + -1.5
1,115,140 + -3.1
1,115,142 + 0.0
1,115,151 + -2.1
1,115,152 - -3.4
1,115,154 - -0.3
1,115,154 - -2.3
1,115,155 + -2.1
1,115,158 - -2.3
1,115,176 - -1.6
1,115,202 - -2.2
1,115,295 - -0.5
1,115,451 - 16174 mRNA_7806 0.14 -0.4
1,115,471 - 16174 mRNA_7806 0.19 0.2
1,115,745 + 16174 mRNA_7806 0.76 -0.8
1,115,773 + 16174 mRNA_7806 0.82 0.4
1,115,908 - -2.4
1,115,930 - -1.1