Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7801

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7800: 16168 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 1096651 to 1099129 16168 mRNA_7801: 16169 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 1099956 to 1102203 16169 mRNA_7802: 16170 - KOG3519 Invasion-inducing protein TIAM1/CDC24 and related RhoGEF GTPases, at 1102710 to 1107641 16170

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,099,265 - -0.4
1,099,339 - -0.9
1,099,395 - 0.8
1,099,511 - -3.1
1,099,552 - -1.7
1,099,568 - -3.6
1,099,574 - 0.3
1,099,595 + -0.2
1,099,717 + -2.8
1,099,717 - -1.5
1,099,852 + -0.1
1,100,446 + 16169 mRNA_7801 0.22 -2.5
1,100,581 + 16169 mRNA_7801 0.28 -3.2
1,100,712 - 16169 mRNA_7801 0.34 -0.1
1,100,758 + 16169 mRNA_7801 0.36 -2.1
1,100,766 + 16169 mRNA_7801 0.36 -1.0
1,100,924 - 16169 mRNA_7801 0.43 0.1
1,101,243 + 16169 mRNA_7801 0.57 -0.4
1,101,625 + 16169 mRNA_7801 0.74 -0.6
1,101,630 + 16169 mRNA_7801 0.74 -1.0
1,102,072 + -2.4
1,102,213 - 0.1
1,102,380 + -3.9
1,102,430 + -1.4
1,102,499 - -2.0
1,102,524 + 0.5
1,102,685 + -0.2