Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7726

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7725: 16093 - Hypothetical Protein, at 933861 to 936370 16093 mRNA_7726: 16094 - KOG1231 Proteins containing the FAD binding domain, at 937355 to 939752 16094 mRNA_7727: 16095 - K13354 SLC25A17, PMP34 solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17, at 940127 to 941686 16095

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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936,665 - -0.7
936,669 + -2.8
936,675 - -0.0
936,718 + -2.0
936,718 - -3.2
936,791 + 0.1
936,793 - -1.4
936,795 - -0.9
936,833 - -0.4
936,834 + -1.5
936,948 - -0.0
936,966 - -2.3
936,978 - -3.3
936,987 - -2.1
937,082 + -0.5
937,108 - -2.6
937,111 - -1.7
937,122 - -1.8
937,153 - -2.0
937,257 - -1.7
937,274 - 0.6
937,291 + -1.3
937,312 - -3.2
937,418 - -0.3
937,423 - 0.2
937,536 - -0.3
938,501 + 16094 mRNA_7726 0.48 0.4
938,578 + 16094 mRNA_7726 0.51 -2.9
938,589 + 16094 mRNA_7726 0.51 -1.6
938,715 + 16094 mRNA_7726 0.57 -0.5
938,739 - 16094 mRNA_7726 0.58 -0.7
939,014 + 16094 mRNA_7726 0.69 -2.0
939,135 + 16094 mRNA_7726 0.74 0.3
939,734 - -0.5
939,884 - -2.0
939,891 - -2.0
939,909 - -1.8
939,909 + -2.3
939,937 + 0.0
939,959 - -0.0
940,191 - -1.7
940,220 + -0.6
940,266 + 0.7
940,268 - -0.6
940,510 - 16095 mRNA_7727 0.25 -2.1
940,531 + 16095 mRNA_7727 0.26 -2.0
940,536 - 16095 mRNA_7727 0.26 -4.0
940,544 + 16095 mRNA_7727 0.27 -1.6