Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7725

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7724: 16092 - KOG2644 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes, at 932061 to 933452 16092 mRNA_7725: 16093 - Hypothetical Protein, at 933861 to 936370 16093 mRNA_7726: 16094 - KOG1231 Proteins containing the FAD binding domain, at 937355 to 939752 16094

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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933,038 - 16092 mRNA_7724 0.70 -1.0
933,068 - 16092 mRNA_7724 0.72 -0.1
933,307 - 16092 mRNA_7724 0.90 -1.0
933,356 - -3.2
933,363 + -1.4
933,369 + -1.8
933,375 + -0.7
933,489 - -2.5
933,505 - -0.3
933,512 + -1.7
933,512 - -1.3
933,521 + -1.4
933,523 + -2.2
933,531 - -0.3
933,536 + -2.3
933,649 + -1.1
933,673 - 0.0
933,686 + -1.7
933,704 + -2.6
933,863 + 0.2
934,103 + 0.3
934,743 - 16093 mRNA_7725 0.35 -0.4
934,920 + 16093 mRNA_7725 0.42 0.1
935,081 - 16093 mRNA_7725 0.49 -1.9
935,093 + 16093 mRNA_7725 0.49 -2.3
935,363 + 16093 mRNA_7725 0.60 -2.2
935,409 + 16093 mRNA_7725 0.62 -2.9
935,889 - 16093 mRNA_7725 0.81 -0.0
935,932 - 16093 mRNA_7725 0.83 -1.4
935,936 + 16093 mRNA_7725 0.83 -1.5
935,947 + 16093 mRNA_7725 0.83 -0.3
936,278 + -3.2
936,285 + -0.7
936,345 + -1.3
936,665 - -0.7
936,669 + -2.8
936,675 - -0.0
936,718 + -2.0
936,718 - -3.2
936,791 + 0.1
936,793 - -1.4
936,795 - -0.9
936,833 - -0.4
936,834 + -1.5
936,948 - -0.0
936,966 - -2.3
936,978 - -3.3
936,987 - -2.1
937,082 + -0.5
937,108 - -2.6
937,111 - -1.7
937,122 - -1.8
937,153 - -2.0
937,257 - -1.7
937,274 - 0.6
937,291 + -1.3
937,312 - -3.2