Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7724

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7723: 16091 - HMMPfam-Domain of unknown function (DUF427)-PF04248, at 931116 to 931814 16091 mRNA_7724: 16092 - KOG2644 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes, at 932061 to 933452 16092 mRNA_7725: 16093 - Hypothetical Protein, at 933861 to 936370 16093

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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931,144 - -0.2
931,282 + 16091 mRNA_7723 0.24 -1.2
931,309 - 16091 mRNA_7723 0.28 -1.2
931,314 + 16091 mRNA_7723 0.28 -1.2
931,640 - 16091 mRNA_7723 0.75 -1.5
931,754 + -3.2
931,763 + -0.9
931,773 + -1.1
931,810 + -1.1
931,905 - -0.8
931,944 - 0.4
932,104 + -2.0
932,107 - -1.3
932,228 + 16092 mRNA_7724 0.12 0.6
932,263 + 16092 mRNA_7724 0.15 0.2
932,339 + 16092 mRNA_7724 0.20 -1.4
932,377 - 16092 mRNA_7724 0.23 -2.2
932,500 + 16092 mRNA_7724 0.32 0.1
932,542 - 16092 mRNA_7724 0.35 -0.8
932,542 + 16092 mRNA_7724 0.35 -3.1
932,776 - 16092 mRNA_7724 0.51 -1.7
933,038 - 16092 mRNA_7724 0.70 -1.0
933,068 - 16092 mRNA_7724 0.72 -0.1
933,307 - 16092 mRNA_7724 0.90 -1.0
933,356 - -3.2
933,363 + -1.4
933,369 + -1.8
933,375 + -0.7
933,489 - -2.5
933,505 - -0.3
933,512 + -1.7
933,512 - -1.3
933,521 + -1.4
933,523 + -2.2
933,531 - -0.3
933,536 + -2.3
933,649 + -1.1
933,673 - 0.0
933,686 + -1.7
933,704 + -2.6
933,863 + 0.2
934,103 + 0.3