Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7716

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7715: 16083 - K05906 PCYOX1, FCLY prenylcysteine oxidase / farnesylcysteine lyase, at 912208 to 914199 16083 mRNA_7716: 16084 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 914377 to 916926 16084 mRNA_7717: 16085 - K17979 MDM31 mitochondrial distribution and morphology protein 31, at 916974 to 919453 16085

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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913,428 + 16083 mRNA_7715 0.61 -0.5
913,558 - 16083 mRNA_7715 0.68 -1.4
913,778 - 16083 mRNA_7715 0.79 -2.4
913,848 + 16083 mRNA_7715 0.82 -1.7
913,859 - 16083 mRNA_7715 0.83 -1.0
913,997 - 16083 mRNA_7715 0.90 -0.2
914,316 - -1.3
914,340 - -2.3
914,461 + -3.1
914,555 + -1.8
914,617 - -2.8
914,621 + -3.4
914,806 + 16084 mRNA_7716 0.17 -0.2
915,005 + 16084 mRNA_7716 0.25 -1.2
915,067 - 16084 mRNA_7716 0.27 -0.1
915,177 - 16084 mRNA_7716 0.31 2.0
915,289 + 16084 mRNA_7716 0.36 -0.5
915,323 + 16084 mRNA_7716 0.37 -2.7
915,328 - 16084 mRNA_7716 0.37 -1.6
915,654 + 16084 mRNA_7716 0.50 -1.9
915,730 - 16084 mRNA_7716 0.53 -3.2
916,007 + 16084 mRNA_7716 0.64 -2.7
916,079 + 16084 mRNA_7716 0.67 -1.2
916,107 + 16084 mRNA_7716 0.68 0.4
916,207 + 16084 mRNA_7716 0.72 -0.6
916,443 - 16084 mRNA_7716 0.81 -2.5
916,741 + -3.4
916,751 + -1.1
916,754 - -0.6
916,763 + -0.7
916,803 + -0.8
916,806 + -1.1
916,949 + -4.0
916,976 - -2.2