Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7715

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7714: 16082 - Hypothetical Protein, at 910983 to 911507 16082 mRNA_7715: 16083 - K05906 PCYOX1, FCLY prenylcysteine oxidase / farnesylcysteine lyase, at 912208 to 914199 16083 mRNA_7716: 16084 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 914377 to 916926 16084

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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911,224 + 16082 mRNA_7714 0.46 0.9
911,356 + 16082 mRNA_7714 0.71 -1.2
911,405 + 16082 mRNA_7714 0.80 -2.7
911,405 + 16082 mRNA_7714 0.80 -3.2
911,683 - -1.3
911,822 + -0.3
912,027 + -3.5
912,030 + 0.2
912,149 - -2.7
912,215 - -0.2
912,249 + -0.9
912,265 - -1.6
912,369 + 1.9
912,378 + 1.1
912,528 - 16083 mRNA_7715 0.16 -1.1
913,183 - 16083 mRNA_7715 0.49 -2.7
913,428 + 16083 mRNA_7715 0.61 -0.5
913,558 - 16083 mRNA_7715 0.68 -1.4
913,778 - 16083 mRNA_7715 0.79 -2.4
913,848 + 16083 mRNA_7715 0.82 -1.7
913,859 - 16083 mRNA_7715 0.83 -1.0
913,997 - 16083 mRNA_7715 0.90 -0.2
914,316 - -1.3
914,340 - -2.3
914,461 + -3.1
914,555 + -1.8
914,617 - -2.8
914,621 + -3.4
914,806 + 16084 mRNA_7716 0.17 -0.2
915,005 + 16084 mRNA_7716 0.25 -1.2
915,067 - 16084 mRNA_7716 0.27 -0.1
915,177 - 16084 mRNA_7716 0.31 2.0