Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7698

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7697: 16065 - K00815 TAT tyrosine aminotransferase, at 862467 to 863875 16065 mRNA_7698: 16066 - Hypothetical Protein, at 864285 to 865332 16066 mRNA_7699: 16067 - K11681 SWR1 helicase SWR1, at 865523 to 871227 16067

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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863,402 - 16065 mRNA_7697 0.66 0.8
863,578 - 16065 mRNA_7697 0.79 -2.2
863,581 + 16065 mRNA_7697 0.79 0.3
863,588 + 16065 mRNA_7697 0.80 -0.2
863,664 - 16065 mRNA_7697 0.85 -1.1
863,677 + 16065 mRNA_7697 0.86 -1.2
863,709 - 16065 mRNA_7697 0.88 0.6
863,710 + 16065 mRNA_7697 0.88 -1.7
863,734 + 16065 mRNA_7697 0.90 0.9
863,974 + -3.5
863,980 + -0.5
863,984 + 0.9
863,996 - -1.2
864,000 + -1.7
864,004 - 1.1
864,017 + -1.5
864,020 - -0.8
864,027 - -0.4
864,033 + -4.0
864,034 - -0.1
864,036 + -0.4
864,060 - -2.4
864,061 + -2.7
864,062 + 0.2
864,076 - -1.4
864,076 - -2.7
864,083 - -4.3
864,086 - -2.6
864,089 + -1.7
864,089 + -3.2
864,118 - -0.4
864,118 - 3.0
864,118 + -1.0
864,235 + -0.2
864,245 + -1.6
864,318 - -1.4
864,361 - -4.5
864,371 - -1.4
864,382 - -2.9
864,794 - 16066 mRNA_7698 0.49 -1.6
864,982 + 16066 mRNA_7698 0.67 -1.4
865,147 - 16066 mRNA_7698 0.82 -0.3
865,147 - 16066 mRNA_7698 0.82 0.4
865,306 + -0.1