Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7695

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7694: 16062 - K12581 CNOT7_8, CAF1, POP2 CCR4-NOT transcription complex subunit 7/8, at 853863 to 855272 16062 mRNA_7695: 16063 - HMMPfam-Domain of unknown function (DUF1992)-PF09350, at 855931 to 857738 16063

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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855,455 - 0.3
855,592 - -2.2
855,621 - -1.3
855,624 + -3.4
855,627 + -4.0
855,629 + -4.2
855,629 - -0.6
855,632 + -0.4
855,740 - -3.3
855,769 + -0.6
855,775 + -0.6
856,266 + 16063 mRNA_7695 0.19 -0.7
856,406 + 16063 mRNA_7695 0.26 -0.2
856,515 + 16063 mRNA_7695 0.32 -4.3
856,784 + 16063 mRNA_7695 0.47 -4.2
856,787 + 16063 mRNA_7695 0.47 -0.1
857,191 + 16063 mRNA_7695 0.70 -2.5
857,221 - 16063 mRNA_7695 0.71 0.3
857,793 + -1.7
857,931 + 0.1
857,943 - -0.0
857,961 - -2.1
857,963 - -0.8
858,060 - -2.5
858,071 - -3.8
858,073 + 0.1
858,074 - -1.2
858,082 - -2.0
858,529 + -2.9
858,667 - -1.3