Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7689

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7688: 16056 - Hypothetical Protein, at 840776 to 844586 16056 mRNA_7689: 16057 - BLAST triacylglycerol lipase [Pochonia chlamydosporia 170], at 844796 to 845727 16057 mRNA_7690: 16058 - BLAST proteophosphoglycan ppg4 [Moesziomyces aphidis DSM 70..., at 846247 to 848747 16058

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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843,801 - 16056 mRNA_7688 0.79 -1.1
843,878 + 16056 mRNA_7688 0.81 -1.3
843,993 + 16056 mRNA_7688 0.84 0.1
844,075 - 16056 mRNA_7688 0.87 -1.9
844,197 - 16056 mRNA_7688 0.90 -2.9
844,237 - -0.7
844,516 + -0.6
844,521 - -1.2
844,585 + -0.4
844,592 - -2.7
844,713 - 0.5
845,021 + 16057 mRNA_7689 0.24 -0.4
845,154 + 16057 mRNA_7689 0.38 0.4
845,157 - 16057 mRNA_7689 0.39 -1.1
845,281 + 16057 mRNA_7689 0.52 -1.5
845,370 - 16057 mRNA_7689 0.62 -1.3
845,373 - 16057 mRNA_7689 0.62 -3.0
845,510 - 16057 mRNA_7689 0.77 -1.5
845,586 + 16057 mRNA_7689 0.85 -1.0
845,696 + -1.2
845,704 + -2.1
845,713 - -4.1
845,728 + -1.3
845,826 + -0.3
845,864 + -2.0
845,871 - -1.4
845,878 + -3.4
845,966 - -1.4
845,997 + -0.9
845,998 - -0.3
846,005 - 0.8
846,020 + -0.6
846,038 - -0.8
846,299 + -0.0
846,386 - -1.3
846,498 - 16058 mRNA_7690 0.10 -2.8
846,666 - 16058 mRNA_7690 0.17 1.1
846,677 + 16058 mRNA_7690 0.17 -2.0