Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7688

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7687: 16055 - SUPERFAMILY--SSF48371, at 838504 to 840672 16055 mRNA_7688: 16056 - Hypothetical Protein, at 840776 to 844586 16056 mRNA_7689: 16057 - BLAST triacylglycerol lipase [Pochonia chlamydosporia 170], at 844796 to 845727 16057

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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839,776 - 16055 mRNA_7687 0.59 -1.1
839,893 - 16055 mRNA_7687 0.64 -0.4
839,893 - 16055 mRNA_7687 0.64 0.5
839,901 + 16055 mRNA_7687 0.64 -0.3
839,966 - 16055 mRNA_7687 0.67 -2.6
839,988 + 16055 mRNA_7687 0.68 -2.9
840,006 - 16055 mRNA_7687 0.69 -0.1
840,297 - 16055 mRNA_7687 0.83 -0.1
840,337 + 16055 mRNA_7687 0.85 -0.6
840,619 - -3.0
840,623 - -1.5
840,623 - -1.2
840,624 + -0.7
840,626 - -0.5
840,627 + -3.3
840,774 + 0.4
840,781 + 0.4
840,883 - -3.6
840,920 + -1.0
841,048 - -2.0
841,217 - 16056 mRNA_7688 0.12 -1.1
841,329 - 16056 mRNA_7688 0.15 -0.0
841,364 - 16056 mRNA_7688 0.15 -0.4
841,503 - 16056 mRNA_7688 0.19 -0.4
841,542 - 16056 mRNA_7688 0.20 1.0
841,604 + 16056 mRNA_7688 0.22 1.2
841,651 + 16056 mRNA_7688 0.23 -0.5
841,661 - 16056 mRNA_7688 0.23 -1.1
841,678 + 16056 mRNA_7688 0.24 0.1
841,708 - 16056 mRNA_7688 0.24 -2.0
841,776 - 16056 mRNA_7688 0.26 -1.0
841,776 - 16056 mRNA_7688 0.26 -0.9
841,841 + 16056 mRNA_7688 0.28 -2.9
841,925 - 16056 mRNA_7688 0.30 -1.9
841,940 + 16056 mRNA_7688 0.31 -1.0
842,047 - 16056 mRNA_7688 0.33 -0.1
842,047 - 16056 mRNA_7688 0.33 -1.4
842,213 - 16056 mRNA_7688 0.38 0.4
842,221 - 16056 mRNA_7688 0.38 -4.0
842,356 - 16056 mRNA_7688 0.41 -1.7
842,514 - 16056 mRNA_7688 0.46 0.7
842,539 - 16056 mRNA_7688 0.46 1.2
842,660 - 16056 mRNA_7688 0.49 -2.3
842,678 - 16056 mRNA_7688 0.50 -2.3
842,834 - 16056 mRNA_7688 0.54 -3.6
842,855 + 16056 mRNA_7688 0.55 -0.2
842,917 - 16056 mRNA_7688 0.56 -1.3
842,987 + 16056 mRNA_7688 0.58 -0.7
843,062 + 16056 mRNA_7688 0.60 0.0
843,097 - 16056 mRNA_7688 0.61 -1.2
843,139 + 16056 mRNA_7688 0.62 -1.1
843,139 + 16056 mRNA_7688 0.62 0.9
843,139 + 16056 mRNA_7688 0.62 -3.1
843,238 + 16056 mRNA_7688 0.65 -1.6
843,257 + 16056 mRNA_7688 0.65 -2.6
843,676 - 16056 mRNA_7688 0.76 -1.3
843,717 + 16056 mRNA_7688 0.77 -2.7
843,731 - 16056 mRNA_7688 0.78 0.4
843,773 - 16056 mRNA_7688 0.79 -2.4
843,795 - 16056 mRNA_7688 0.79 -1.9
843,801 - 16056 mRNA_7688 0.79 -1.1
843,878 + 16056 mRNA_7688 0.81 -1.3
843,993 + 16056 mRNA_7688 0.84 0.1
844,075 - 16056 mRNA_7688 0.87 -1.9
844,197 - 16056 mRNA_7688 0.90 -2.9
844,237 - -0.7
844,516 + -0.6
844,521 - -1.2
844,585 + -0.4
844,592 - -2.7
844,713 - 0.5
845,021 + 16057 mRNA_7689 0.24 -0.4
845,154 + 16057 mRNA_7689 0.38 0.4
845,157 - 16057 mRNA_7689 0.39 -1.1
845,281 + 16057 mRNA_7689 0.52 -1.5
845,370 - 16057 mRNA_7689 0.62 -1.3
845,373 - 16057 mRNA_7689 0.62 -3.0
845,510 - 16057 mRNA_7689 0.77 -1.5
845,586 + 16057 mRNA_7689 0.85 -1.0