Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7628

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7627: 15995 - K01273 DPEP membrane dipeptidase, at 711202 to 712775 15995 mRNA_7628: 15996 - KOG1721 FOG Zn-finger, at 712863 to 715455 15996 mRNA_7629: 15997 - K20474 RINT1, TIP20 RAD50-interacting protein 1, at 715585 to 720215 15997

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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712,103 + 15995 mRNA_7627 0.57 -2.1
712,140 + 15995 mRNA_7627 0.60 -1.4
712,156 - 15995 mRNA_7627 0.61 -3.4
712,264 - 15995 mRNA_7627 0.67 -2.6
712,578 - 15995 mRNA_7627 0.87 -1.4
712,603 - 15995 mRNA_7627 0.89 -1.3
712,717 + 1.0
712,872 + -1.9
713,154 - 15996 mRNA_7628 0.11 -2.0
713,454 - 15996 mRNA_7628 0.23 -2.8
713,477 - 15996 mRNA_7628 0.24 -3.2
713,516 + 15996 mRNA_7628 0.25 -2.2
713,550 + 15996 mRNA_7628 0.26 1.8
713,602 - 15996 mRNA_7628 0.28 -1.0
714,202 - 15996 mRNA_7628 0.52 -1.0
714,335 - 15996 mRNA_7628 0.57 -1.5
714,368 + 15996 mRNA_7628 0.58 -1.1
715,056 + 15996 mRNA_7628 0.85 -1.4
715,064 - 15996 mRNA_7628 0.85 -0.6
715,071 + 15996 mRNA_7628 0.85 -3.2
715,507 - -2.0
715,509 - -1.8
715,514 - -0.0
716,244 + 15997 mRNA_7629 0.14 -1.8
716,245 + 15997 mRNA_7629 0.14 -2.3
716,253 + 15997 mRNA_7629 0.14 -0.9