Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7597

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7596: 15964 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 647163 to 648088 15964 mRNA_7597: 15965 - Hypothetical Protein, at 648262 to 649679 15965 mRNA_7598: 15966 - K01102 PDP pyruvate dehydrogenase phosphatase, at 649917 to 652257 15966

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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647,267 - 15964 mRNA_7596 0.11 -0.9
647,280 + 15964 mRNA_7596 0.13 -1.9
647,281 + 15964 mRNA_7596 0.13 -2.0
647,281 - 15964 mRNA_7596 0.13 -1.2
647,287 + 15964 mRNA_7596 0.13 -1.3
647,441 - 15964 mRNA_7596 0.30 -0.7
647,733 + 15964 mRNA_7596 0.62 -0.9
647,767 + 15964 mRNA_7596 0.65 -2.1
648,019 + -1.7
648,022 - -1.2
648,036 + -1.4
648,036 + -2.4
648,297 + -1.8
648,324 - -1.4
648,460 + 15965 mRNA_7597 0.14 -2.5
648,588 - 15965 mRNA_7597 0.23 -1.6
648,883 - 15965 mRNA_7597 0.44 0.8
649,134 - 15965 mRNA_7597 0.61 -3.0
649,274 - 15965 mRNA_7597 0.71 -2.5
649,572 - -3.7
649,578 - -0.3
649,579 + -0.6
649,717 + -0.4
649,730 + -0.0
649,873 + 0.5
649,875 - -1.7
650,023 + -3.2
650,187 + 15966 mRNA_7598 0.12 -2.2
650,308 - 15966 mRNA_7598 0.17 -2.1
650,322 - 15966 mRNA_7598 0.17 0.8
650,341 + 15966 mRNA_7598 0.18 -2.0
650,353 + 15966 mRNA_7598 0.19 -2.7
650,622 + 15966 mRNA_7598 0.30 -1.4