Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7590

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7589: 15957 - K19785 POF1 nicotinamide-nucleotide adenylyltransferase, at 629580 to 630504 15957 mRNA_7590: 15958 - Hypothetical Protein, at 630587 to 632557 15958 mRNA_7591: 15959 - Hypothetical Protein, at 632641 to 636261 15959

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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629,636 - -0.2
629,776 - 15957 mRNA_7589 0.21 -3.5
629,776 + 15957 mRNA_7589 0.21 -2.2
629,783 - 15957 mRNA_7589 0.22 -1.6
629,791 + 15957 mRNA_7589 0.23 -0.9
629,798 + 15957 mRNA_7589 0.24 1.2
629,800 + 15957 mRNA_7589 0.24 -0.7
629,919 - 15957 mRNA_7589 0.37 -1.3
630,363 - 15957 mRNA_7589 0.85 -2.8
630,389 + 15957 mRNA_7589 0.87 -1.2
630,437 - 0.4
630,842 + 15958 mRNA_7590 0.13 -0.5
630,849 - 15958 mRNA_7590 0.13 -0.2
630,909 + 15958 mRNA_7590 0.16 -0.9
631,441 + 15958 mRNA_7590 0.43 -2.4
631,832 - 15958 mRNA_7590 0.63 0.2
632,138 - 15958 mRNA_7590 0.79 -0.9
632,159 + 15958 mRNA_7590 0.80 -1.3
632,286 - 15958 mRNA_7590 0.86 -1.1
632,297 - 15958 mRNA_7590 0.87 -1.7
632,313 + 15958 mRNA_7590 0.88 -0.3
632,315 + 15958 mRNA_7590 0.88 -1.8
632,319 + 15958 mRNA_7590 0.88 -3.8
632,370 - -3.3
632,453 + -2.2
632,602 + -2.1
632,621 - -1.0
632,690 - -0.6
632,713 + -1.7
632,758 - -1.6
632,775 + -2.3
632,873 + -0.2
632,876 - -1.5
632,919 + -1.0
632,922 + -0.4
632,963 + -2.3
633,035 - 15959 mRNA_7591 0.11 -1.5
633,047 + 15959 mRNA_7591 0.11 -0.1
633,054 - 15959 mRNA_7591 0.11 1.2
633,192 - 15959 mRNA_7591 0.15 -0.6
633,201 - 15959 mRNA_7591 0.15 -0.6
633,316 + 15959 mRNA_7591 0.19 -3.5
633,321 - 15959 mRNA_7591 0.19 -0.7
633,368 - 15959 mRNA_7591 0.20 -1.2
633,385 + 15959 mRNA_7591 0.21 -0.3