Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7588

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7587: 15955 - HMMPfam-Protein of unknown function (DUF2413)-PF10310, at 621699 to 623748 15955 mRNA_7588: 15956 - Hypothetical Protein, at 623955 to 629387 15956 mRNA_7589: 15957 - K19785 POF1 nicotinamide-nucleotide adenylyltransferase, at 629580 to 630504 15957

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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622,995 - 15955 mRNA_7587 0.63 -1.0
623,063 + 15955 mRNA_7587 0.67 -2.9
623,379 + 15955 mRNA_7587 0.82 1.0
623,576 + -0.7
623,878 - -1.4
623,894 + -0.9
624,632 - 15956 mRNA_7588 0.12 -0.9
627,593 + 15956 mRNA_7588 0.67 -1.2
627,603 + 15956 mRNA_7588 0.67 -0.0
628,019 - 15956 mRNA_7588 0.75 0.5
628,322 + 15956 mRNA_7588 0.80 -0.7
628,663 - 15956 mRNA_7588 0.87 0.8
629,203 - -1.0
629,210 - -2.7
629,211 + -2.4
629,339 + 1.3
629,361 + -2.0
629,636 - -0.2
629,776 - 15957 mRNA_7589 0.21 -3.5
629,776 + 15957 mRNA_7589 0.21 -2.2
629,783 - 15957 mRNA_7589 0.22 -1.6
629,791 + 15957 mRNA_7589 0.23 -0.9
629,798 + 15957 mRNA_7589 0.24 1.2
629,800 + 15957 mRNA_7589 0.24 -0.7
629,919 - 15957 mRNA_7589 0.37 -1.3
630,363 - 15957 mRNA_7589 0.85 -2.8