Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7546

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7544: 15912 - K07552 bcr MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein, at 529753 to 531940 15912 mRNA_7545: 15913 - Hypothetical Protein, at 532000 to 532304 15913 mRNA_7546: 15914 - K04523 UBQLN, DSK2 ubiquilin, at 532517 to 534299 15914 mRNA_7547: 15915 - Hypothetical Protein, at 534942 to 536762 15915

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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531,760 - -0.4
532,374 + -0.7
532,401 + -0.2
532,641 - 0.0
532,822 - 15914 mRNA_7546 0.17 -0.1
533,280 - 15914 mRNA_7546 0.43 -1.6
533,529 - 15914 mRNA_7546 0.57 -2.4
533,659 - 15914 mRNA_7546 0.64 -0.6
533,798 + 15914 mRNA_7546 0.72 -2.4
533,807 - 15914 mRNA_7546 0.72 -2.1
533,819 - 15914 mRNA_7546 0.73 -3.1
533,819 + 15914 mRNA_7546 0.73 -1.9
533,942 - 15914 mRNA_7546 0.80 -3.5
533,948 - 15914 mRNA_7546 0.80 -1.0
533,952 + 15914 mRNA_7546 0.80 -0.1
533,952 + 15914 mRNA_7546 0.80 -0.3
533,961 - 15914 mRNA_7546 0.81 0.7
533,961 - 15914 mRNA_7546 0.81 -2.1
534,091 - 15914 mRNA_7546 0.88 -2.8
534,112 + 15914 mRNA_7546 0.89 -1.9
534,254 - 0.3
534,259 + -3.8
534,259 - -0.9
534,262 + -0.3
534,265 + -0.9
534,265 + -2.4
534,284 + -1.5
534,419 - -1.7
534,550 - -1.7
534,563 - -1.8
534,573 + -2.1