Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7537

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7536: 15904 - KOG2216 Conserved coiled/coiled coil protein, at 513749 to 514681 15904 mRNA_7537: 15905 - K13524 ABAT 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase, at 514808 to 517082 15905 mRNA_7538: 15906 - BLAST allergen [Malassezia sympodialis ATCC 42132], at 517362 to 518534 15906

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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513,869 - 15904 mRNA_7536 0.13 -2.3
513,873 + 15904 mRNA_7536 0.13 -2.4
513,887 - 15904 mRNA_7536 0.15 -1.2
514,016 + 15904 mRNA_7536 0.29 -0.9
514,688 + 0.8
514,730 + -1.1
514,746 + 0.3
514,763 - -3.0
515,048 + 15905 mRNA_7537 0.11 -2.4
515,193 + 15905 mRNA_7537 0.17 0.2
515,203 + 15905 mRNA_7537 0.17 -2.3
515,207 - 15905 mRNA_7537 0.18 -2.3
515,213 - 15905 mRNA_7537 0.18 -2.7
515,215 + 15905 mRNA_7537 0.18 -2.3
515,259 + 15905 mRNA_7537 0.20 -1.9
515,821 + 15905 mRNA_7537 0.45 -2.3
516,355 + 15905 mRNA_7537 0.68 -2.8
516,412 - 15905 mRNA_7537 0.71 -1.1
516,420 + 15905 mRNA_7537 0.71 -0.5
517,385 - -2.4