Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7513

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7512: 15880 - HMMPfam-ATP synthase E chain-PF05680, at 469028 to 469780 15880 mRNA_7513: 15881 - KOG3267 Uncharacterized conserved protein, at 470046 to 470823 15881 mRNA_7514: 15882 - K11757 PBRM1, PB1 protein polybromo-1, at 471027 to 473637 15882

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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469,695 + 15880 mRNA_7512 0.89 0.4
469,712 + 1.9
469,828 - -0.4
469,852 + -3.7
469,868 + -0.6
470,114 + -2.3
470,142 + 15881 mRNA_7513 0.12 -2.0
470,150 - 15881 mRNA_7513 0.13 -3.3
470,170 - 15881 mRNA_7513 0.16 0.1
470,319 + 15881 mRNA_7513 0.35 -3.2
470,457 + 15881 mRNA_7513 0.53 -1.4
470,717 - 15881 mRNA_7513 0.86 -0.7
471,032 + -1.4
471,598 + 15882 mRNA_7514 0.22 -0.4
471,619 - 15882 mRNA_7514 0.23 -0.7
471,752 - 15882 mRNA_7514 0.28 0.6