Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7467

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7466: 15834 - K17887 SNX25, MDM1 sorting nexin-25, at 345181 to 349645 15834 mRNA_7467: 15835 - Hypothetical Protein, at 349793 to 351109 15835 mRNA_7468: 15836 - Hypothetical Protein, at 351460 to 352308 15836

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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349,006 + 15834 mRNA_7466 0.86 -1.3
349,279 + 0.1
349,279 + -0.4
349,293 + -1.3
349,391 + -1.3
349,409 + -2.8
349,439 - -1.2
349,449 + -0.9
349,569 - -3.2
349,571 - -0.9
349,579 - -1.1
349,579 - -1.1
349,582 - -1.4
349,725 + 0.5
349,744 + 0.8
349,749 + 1.8
349,904 - 0.8
350,015 - 15835 mRNA_7467 0.17 -1.2
350,022 - 15835 mRNA_7467 0.17 -1.7
350,027 + 15835 mRNA_7467 0.18 0.5
350,136 + 15835 mRNA_7467 0.26 -1.7
350,315 - 15835 mRNA_7467 0.40 0.0
350,320 + 15835 mRNA_7467 0.40 0.5
350,324 - 15835 mRNA_7467 0.40 -0.2
350,337 - 15835 mRNA_7467 0.41 -4.3
350,486 - 15835 mRNA_7467 0.53 -1.2
350,587 - 15835 mRNA_7467 0.60 -2.5
350,617 + 15835 mRNA_7467 0.63 -1.6
350,778 - 15835 mRNA_7467 0.75 -0.8
351,054 + -2.0
351,104 + -2.4
351,199 - -1.5
351,211 + -0.9
351,327 - 0.0
351,476 - -2.9
351,488 + -0.4
351,630 - 15836 mRNA_7468 0.20 -1.3
351,736 + 15836 mRNA_7468 0.33 3.0
351,781 - 15836 mRNA_7468 0.38 -1.8
351,797 - 15836 mRNA_7468 0.40 -0.5
351,913 + 15836 mRNA_7468 0.53 -2.8
352,028 - 15836 mRNA_7468 0.67 0.8