Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7463

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7462: 15830 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 334859 to 336377 15830 mRNA_7463: 15831 - Hypothetical Protein, at 337178 to 338673 15831 mRNA_7464: 15832 - BLAST expressed protein [Schizophyllum commune H4-8], at 339268 to 340751 15832

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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336,241 - 0.4
336,506 - -2.2
336,523 + -4.0
336,972 - 2.7
336,978 - -0.4
336,982 + -1.8
336,983 + -0.8
336,994 + -0.6
336,994 + -0.9
336,994 + -0.4
337,004 - -3.8
337,007 + -1.1
337,011 + -2.7
337,020 + -2.1
337,048 + -0.1
337,151 - -0.1
337,230 + 0.2
337,703 + 15831 mRNA_7463 0.35 -2.4
337,933 + 15831 mRNA_7463 0.50 -1.1
338,003 - 15831 mRNA_7463 0.55 0.7
338,202 + 15831 mRNA_7463 0.68 0.8
338,239 - 15831 mRNA_7463 0.71 -2.3
338,305 + 15831 mRNA_7463 0.75 -1.9
338,470 + 15831 mRNA_7463 0.86 1.9
338,738 + 0.3
338,859 + -1.2
338,873 + -2.1
338,925 + -2.5
339,035 - -0.3
339,038 - -2.0
339,174 + -2.0
339,180 - -0.3
339,200 - -3.0
339,331 - -1.9
339,338 + -0.6
339,367 - -1.1
339,482 - 15832 mRNA_7464 0.14 -0.8
339,527 + 15832 mRNA_7464 0.17 0.7
339,529 + 15832 mRNA_7464 0.18 -1.9
339,673 - 15832 mRNA_7464 0.27 -0.5