Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7456

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7455: 15823 - KOG1740 Predicted mitochondrial/chloroplast ribosomal protein S17, at 315184 to 315974 15823 mRNA_7456: 15824 - Hypothetical Protein, at 316330 to 316788 15824

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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315,827 + 15823 mRNA_7455 0.81 -1.5
315,848 + 15823 mRNA_7455 0.84 -1.6
315,980 + -1.6
316,268 + -0.6
316,398 + 15824 mRNA_7456 0.15 -2.0
316,415 + 15824 mRNA_7456 0.19 -0.1
316,555 + 15824 mRNA_7456 0.49 -0.1
316,560 - 15824 mRNA_7456 0.50 -0.4
316,646 - 15824 mRNA_7456 0.69 -0.0
316,685 - 15824 mRNA_7456 0.77 -1.0
316,686 - 15824 mRNA_7456 0.78 -3.0
316,720 - 15824 mRNA_7456 0.85 -4.0
316,839 - -0.8
316,859 + 1.1
316,867 + -0.9
316,907 + 0.4
316,930 + -0.9
316,937 - -0.0
316,944 + -1.5
316,959 + -0.8
316,976 + -1.2
316,979 - -2.0
316,989 + -0.7
316,989 + -1.9
317,003 + -2.5
317,005 - -0.9
317,074 + -2.1
317,191 - -1.0
317,265 + -0.9
317,286 + -2.6
317,286 - -0.7
317,300 + -3.2
317,383 - -1.4
317,405 - 1.4
317,410 + -2.1
317,410 + -0.5
317,430 + -0.8
317,438 + -0.4
317,455 - -1.6
317,466 - 1.1
317,466 + -0.3
317,491 - -2.2
317,521 - -1.7
317,551 - -2.8
317,571 - -0.5
317,608 - -1.8
317,612 + -2.9
317,612 + 0.1
317,615 - -2.6
317,621 + -1.3
317,621 - -1.8
317,621 - -3.7
317,626 + 1.0
317,627 - 2.7
317,628 + -2.2
317,628 + -1.8
317,631 - -2.3
317,633 + -1.7
317,643 - -2.4
317,649 + -2.0
317,651 + 0.3
317,652 + -0.5
317,661 + -0.8
317,670 - -1.4
317,721 - -0.6