Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7451

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7450: 15818 - BLAST proteophosphoglycan protein, putative [Rhizoctonia so..., at 305552 to 306799 15818 mRNA_7451: 15819 - Hypothetical Protein, at 307312 to 308652 15819 mRNA_7452: 15820 - K14852 RRS1 regulator of ribosome biosynthesis, at 309370 to 310696 15820

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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306,474 + 15818 mRNA_7450 0.74 -0.7
306,896 - 0.2
307,115 + -0.4
307,651 - 15819 mRNA_7451 0.25 -0.5
307,659 - 15819 mRNA_7451 0.26 -1.6
307,801 - 15819 mRNA_7451 0.36 -2.2
307,978 + 15819 mRNA_7451 0.50 0.2
308,097 - 15819 mRNA_7451 0.59 -1.1
308,098 - 15819 mRNA_7451 0.59 0.2
308,106 - 15819 mRNA_7451 0.59 -1.0
308,110 + 15819 mRNA_7451 0.60 -2.2
308,114 + 15819 mRNA_7451 0.60 -1.5
308,116 + 15819 mRNA_7451 0.60 1.1
308,404 - 15819 mRNA_7451 0.81 -2.6
308,412 + 15819 mRNA_7451 0.82 -3.3
308,419 + 15819 mRNA_7451 0.83 -1.7
308,695 - -0.9
308,708 + -1.5
308,710 - -1.5
308,717 - -1.4
308,723 + 0.4
308,838 - -2.2
308,846 + -1.1
308,846 + -0.7
308,849 - 0.6
308,854 - -3.7
308,860 - -0.4
308,962 + -0.6
308,986 + -2.4
309,145 + -2.1
309,315 - 0.8
309,316 - -2.2