Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7434

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7433: 15801 - K10356 MYO1 myosin I, at 265180 to 270208 15801 mRNA_7434: 15802 - HMMPfam-Outer membrane protein TOM13-PF08219, at 270590 to 273357 15802 mRNA_7435: 15803 - K09539 DNAJC19 DnaJ homolog subfamily C member 19, at 274120 to 274486 15803

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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269,654 + 15801 mRNA_7433 0.89 1.8
270,258 - -2.1
270,288 - -2.5
270,333 - -2.1
270,446 - -2.0
270,449 - -0.3
270,454 - -2.6
270,555 + -0.5
270,602 + -1.6
270,746 + -1.8
271,824 + 15802 mRNA_7434 0.45 -0.7
272,709 + 15802 mRNA_7434 0.77 0.9
273,432 - -1.7
273,434 + 0.1
273,436 - -0.1
273,438 + -0.5
273,438 - 0.3
273,450 - -2.1
273,458 - 0.7
273,458 - 0.9
273,459 - -1.2
273,463 + -1.2
273,489 + -3.1
273,590 - -2.1
273,595 + -1.7
273,714 - -1.0