Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7426

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7425: 15793 - Hypothetical Protein, at 245564 to 246232 15793 mRNA_7426: 15794 - Hypothetical Protein, at 246763 to 247720 15794 mRNA_7427: 15795 - SUPERFAMILY--SSF51197, at 248497 to 250090 15795

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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245,812 + 15793 mRNA_7425 0.37 0.1
245,813 - 15793 mRNA_7425 0.37 0.1
246,267 + -2.3
246,270 + -0.8
246,282 + -0.6
246,427 + -1.6
246,428 + -2.6
246,550 + -4.2
246,720 + -0.8
246,830 + -0.5
246,861 + 15794 mRNA_7426 0.10 -1.5
246,884 - 15794 mRNA_7426 0.13 -0.0
246,902 + 15794 mRNA_7426 0.15 -0.2
247,012 + 15794 mRNA_7426 0.26 -2.1
247,021 - 15794 mRNA_7426 0.27 -0.8
247,207 + 15794 mRNA_7426 0.46 -0.3
247,328 + 15794 mRNA_7426 0.59 -2.8
247,329 + 15794 mRNA_7426 0.59 -2.0
247,332 - 15794 mRNA_7426 0.59 -2.0
247,334 - 15794 mRNA_7426 0.60 -2.8
247,347 - 15794 mRNA_7426 0.61 -2.6
247,379 - 15794 mRNA_7426 0.64 -2.8
247,383 - 15794 mRNA_7426 0.65 0.7
247,390 + 15794 mRNA_7426 0.65 -3.6
247,397 - 15794 mRNA_7426 0.66 -1.5
247,398 + 15794 mRNA_7426 0.66 -0.4
247,403 - 15794 mRNA_7426 0.67 -2.0
247,406 - 15794 mRNA_7426 0.67 0.7
247,413 + 15794 mRNA_7426 0.68 -1.0
247,416 - 15794 mRNA_7426 0.68 -1.2
247,425 + 15794 mRNA_7426 0.69 -1.4
247,426 - 15794 mRNA_7426 0.69 -0.4
247,427 + 15794 mRNA_7426 0.69 -1.2
247,434 - 15794 mRNA_7426 0.70 -0.5
247,442 - 15794 mRNA_7426 0.71 -1.8
247,539 - 15794 mRNA_7426 0.81 -1.6
247,622 + 15794 mRNA_7426 0.90 -0.6
247,624 - 15794 mRNA_7426 0.90 -0.8
247,635 - 0.8
247,635 - -0.2
247,638 - -1.7
247,649 - -1.4
247,653 + 0.3
247,714 - 0.3
247,724 - -0.1
247,727 - -1.2
247,738 - -3.5
247,739 - -1.4
247,749 + -1.2
247,750 - -3.4
247,750 + -1.3
247,753 + -1.7
247,756 + 0.2
247,757 + 0.9
247,762 - -1.5
247,766 - -1.0
247,767 + -3.4
247,781 + -0.0
247,792 - -2.0
247,793 + -2.0
247,794 + -0.3
247,796 + -3.9
247,799 - 0.6
247,800 + -0.6
247,826 - -2.4
247,833 + 0.3
247,846 + -0.7
247,860 + -3.4
247,865 + -0.6
247,866 - -0.6
247,871 + -0.4
247,884 + -1.4
247,885 - -1.3
247,887 + -2.2
247,888 - 0.4
247,889 - -0.4
247,892 + -0.5
247,892 - -1.2
247,895 + -0.9
247,898 - -0.7
247,919 + -2.3
247,925 + -2.3
247,925 + -2.6
247,927 + -0.5
247,935 + -0.1
247,935 - -1.9
247,935 + -0.7
247,936 - -4.2
247,936 - -1.5
247,965 + -0.8
247,982 - -2.5
247,995 + -1.9
247,996 - -1.7
248,053 - -2.9
248,055 + -0.5
248,059 - 0.4
248,065 - -1.4
248,067 + -0.7
248,072 + -0.2
248,081 - -1.1
248,082 - -3.5
248,083 - 1.0
248,086 + -0.7
248,087 - -1.7
248,128 + 0.0
248,151 - -0.5
248,173 - -0.6
248,187 - -2.3
248,193 - -0.9
248,198 + -1.8
248,210 + -2.1
248,221 - -2.7
248,232 + -2.8
248,346 + -2.2
248,393 - -0.3